DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T1 and psma2a

DIOPT Version :10

Sequence 1:NP_650910.1 Gene:Prosalpha4T1 / 42457 FlyBaseID:FBgn0265606 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_001019612.1 Gene:psma2a / 554153 ZFINID:ZDB-GENE-050522-479 Length:234 Species:Danio rerio


Alignment Length:216 Identity:78/216 - (36%)
Similarity:126/216 - (58%) Gaps:8/216 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSR-YGRALTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKSSVSEMQEDRTVRKI 64
            |:.| |..:||.|||.|.|:|:|||..||..|:.:||::.:|.|||..||...|.:.::::|.|:
Zfish     1 MAERGYSFSLTTFSPSGKLVQIEYALAAVAAGAPSVGIKASNGVVLATEKKQKSILYDEQSVHKV 65

  Fly    65 SMLDRHVALAFAGLTADARILINRGQVECQSHRLNFENQVTLEYITRYLAQLKQKYTQCNGRRPF 129
            ..:.:|:.:.::|:..|.|:|:.|.:...|.:.|.::..:....:.:.:|.:.|:|||..|.|||
Zfish    66 EPITKHIGMVYSGMGPDYRVLVRRARKLAQQYFLVYQEPIPTGQLVQRVASVMQEYTQSGGVRPF 130

  Fly   130 GISCLIGGIDADGSARLFHTEPSGIFHEYKATATGRWANTVREFFEKAYS-DHEVTTKCDAIKLA 193
            |:|.||.|.|.| ...||.::|||.:..:||||.|:.....:.|.||.|: |.|:.   |||..|
Zfish   131 GVSLLIAGWDED-RPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELE---DAIHTA 191

  Fly   194 MRALLE--VTQMSQMRLEVAV 212
            :..|.|  ..||::..:||.:
Zfish   192 ILTLKESFEGQMTEDNIEVGI 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T1NP_650910.1 proteasome_alpha_type_7 5..213 CDD:239724 76/211 (36%)
psma2aNP_001019612.1 proteasome_alpha_type_2 6..231 CDD:239719 76/211 (36%)

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