DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T1 and psma2

DIOPT Version :9

Sequence 1:NP_650910.1 Gene:Prosalpha4T1 / 42457 FlyBaseID:FBgn0265606 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_001016382.1 Gene:psma2 / 549136 XenbaseID:XB-GENE-964711 Length:234 Species:Xenopus tropicalis


Alignment Length:216 Identity:77/216 - (35%)
Similarity:125/216 - (57%) Gaps:8/216 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSR-YGRALTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKSSVSEMQEDRTVRKI 64
            |:.| |..:||.|||.|.|:|:|||..||..|:.:||::..|.|||..||...|.:.::::..|:
 Frog     1 MAERGYSFSLTTFSPSGKLVQIEYALAAVAAGAPSVGIKATNGVVLATEKKQKSILYDEQSAHKV 65

  Fly    65 SMLDRHVALAFAGLTADARILINRGQVECQSHRLNFENQVTLEYITRYLAQLKQKYTQCNGRRPF 129
            ..:.:|:.:.::|:..|.|:|:.|.:...|.:.|.::..:....:.:.:|.:.|:|||..|.|||
 Frog    66 EPITKHIGMVYSGMGPDYRVLVRRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPF 130

  Fly   130 GISCLIGGIDADGSARLFHTEPSGIFHEYKATATGRWANTVREFFEKAYS-DHEVTTKCDAIKLA 193
            |:|.||.|.| :|...||.::|||.:..:||||.|:.....:.|.||.|: |.|:.   |||..|
 Frog   131 GVSLLIAGWD-EGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELE---DAIHTA 191

  Fly   194 MRALLE--VTQMSQMRLEVAV 212
            :..|.|  ..||::..:||.:
 Frog   192 ILTLKESFEGQMTEDNIEVGI 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T1NP_650910.1 PRK03996 5..239 CDD:235192 75/211 (36%)
proteasome_alpha_type_7 5..213 CDD:239724 75/211 (36%)
psma2NP_001016382.1 proteasome_alpha_type_2 6..231 CDD:239719 75/211 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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