DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T1 and psma6b

DIOPT Version :9

Sequence 1:NP_650910.1 Gene:Prosalpha4T1 / 42457 FlyBaseID:FBgn0265606 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_001002589.1 Gene:psma6b / 436862 ZFINID:ZDB-GENE-040718-329 Length:246 Species:Danio rerio


Alignment Length:246 Identity:66/246 - (26%)
Similarity:128/246 - (52%) Gaps:15/246 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SSRYGRALTIFSPDGHLLQVEYAQEAVRKGS-TAVGVRGANCVVLGVEKSSVSEMQEDRTVRKIS 65
            |:.:.|.:|||||:|.|.|||||.:|:.:|. |:|.|||.:|.::..:|....::.:..||..:.
Zfish     6 SAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAIVVTQKKVPDKLLDSSTVTHLF 70

  Fly    66 MLDRHVALAFAGLTADARILINRGQVECQSHRLNFENQVTLEYITRYLAQLKQKYTQCNGRRPFG 130
            .:..::....:|:|||:|..:.|.:.|..:.:..:..::.::.:.:.:|.:.|.|||....||.|
Zfish    71 RITENIGCVMSGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLG 135

  Fly   131 ISCLIGGIDADGSARLFHTEPSGIFHEYKATATGRWANTVREFFEKAYSDHEVTTKCD-----AI 190
            ...::.|:|.:...:::..:|:|.:..:||||.|........|.||     :|..|.|     |:
Zfish   136 CCMIVIGLDEELGPQVYKCDPAGYYCGFKATAAGVKQTEATSFLEK-----KVKKKLDWTFEQAV 195

  Fly   191 KLAMRALLEVTQM----SQMRLEVAVLENGKPMKMLDSVVISEIVKIVQNE 237
            :.|:..|..|..:    |::.:.|...|:.|...:.:|.|.:.:|.:.:.:
Zfish   196 ETAITCLTTVLSIDFKPSELEIGVITAEDPKFRILSESEVDTHLVSLSERD 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T1NP_650910.1 PRK03996 5..239 CDD:235192 65/243 (27%)
proteasome_alpha_type_7 5..213 CDD:239724 60/217 (28%)
psma6bNP_001002589.1 PRE1 7..245 CDD:223711 65/242 (27%)
proteasome_alpha_type_6 8..220 CDD:239723 59/216 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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