DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T1 and Prosalpha6

DIOPT Version :10

Sequence 1:NP_650910.1 Gene:Prosalpha4T1 / 42457 FlyBaseID:FBgn0265606 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_523532.1 Gene:Prosalpha6 / 34359 FlyBaseID:FBgn0250843 Length:279 Species:Drosophila melanogaster


Alignment Length:245 Identity:74/245 - (30%)
Similarity:123/245 - (50%) Gaps:13/245 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SRYGRALTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKSSVSEMQEDRTVRKISML 67
            ::|...:|::||.|.|.|||||.|||:.|:..||::..:..||.......||:.:  |.|||..:
  Fly     4 NQYDSDVTVWSPQGRLHQVEYAMEAVKLGTATVGLKNKDYAVLVALCKPTSELSD--TQRKIIPI 66

  Fly    68 DRHVALAFAGLTADARILINRGQVECQSHRLNFENQVTLEYITRYLAQLKQKYTQCNGRRPFGIS 132
            |.|:.::.||||||||:|....:.||.:::.:::....:..:...|....|..||...|||:|:.
  Fly    67 DDHLGISIAGLTADARVLSRYLRSECLNYKHSYDTTYPVSRLITNLGNKMQTTTQRYDRRPYGVG 131

  Fly   133 CLIGGIDADGSARLFHTEPSGIFHEYKATATGRWANTVREFFEKAYSDHEVTTKCDAIKLAMRAL 197
            .|:.|.|..| ..::...||..|...||.:.|..:.:.|.:.||..:....::|.:.|:..:||:
  Fly   132 LLVAGYDERG-PHIYQVTPSATFFNCKANSIGSRSQSARTYLEKNLNKFLDSSKDEIIRHGIRAI 195

  Fly   198 L-------EVTQMSQMRLEVAVLENGKPMKML---DSVVISEIVKIVQNE 237
            |       :.....|..:.||::...:|..:|   ||.....|.|...|:
  Fly   196 LGTLPTDEQGKDAGQYDITVAIVGKDQPFTILSNKDSAKHVAIAKENDND 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T1NP_650910.1 proteasome_alpha_type_7 5..213 CDD:239724 67/214 (31%)
Prosalpha6NP_523532.1 proteasome_alpha_type_1 6..219 CDD:239718 67/215 (31%)

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