DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T1 and Prosbeta4R2

DIOPT Version :9

Sequence 1:NP_650910.1 Gene:Prosalpha4T1 / 42457 FlyBaseID:FBgn0265606 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_001259950.1 Gene:Prosbeta4R2 / 33451 FlyBaseID:FBgn0031443 Length:210 Species:Drosophila melanogaster


Alignment Length:201 Identity:39/201 - (19%)
Similarity:91/201 - (45%) Gaps:17/201 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 TAVGVRGANCVVLG---VEKSSVSEMQEDRT-VRKISMLDRHVALAFAGLTADARILINRG-QVE 92
            |.:|::|.:.|:|.   ::..|:..|::|:: :.::|..:....:...|.|......|::. .:.
  Fly     5 TILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVGDGGDTIQFTDFISKNLHLY 69

  Fly    93 CQSHRLNFENQVTLEYITRYLAQLKQKYTQCNGRRPFGISCLIGGIDADGSARLFHTEPSGIFHE 157
            ..||..:...:....:..:.||.    |.:.|.|  :.::.|:.|.||.....|.:.:..|....
  Fly    70 KISHGYHLSAKSAAHFTRKTLAD----YIRTNTR--YQVAMLLAGYDAVEGPDLHYIDSYGAAQS 128

  Fly   158 YKATATGRWANTVREFFEKAYSDHEVTTKCDAIKLAMRALLEVTQ---MSQMRLEVAVLENGKPM 219
            ......| |.:.......:.|.:.:::.: ||..|..:.:||:.:   ::|...||.|::: |.|
  Fly   129 INHAGHG-WGSMFCGSILQRYWNSKLSQE-DAYSLMKKCVLEIQRRLIINQRNFEVYVVDS-KGM 190

  Fly   220 KMLDSV 225
            :.::::
  Fly   191 RKMEAI 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T1NP_650910.1 PRK03996 5..239 CDD:235192 39/201 (19%)
proteasome_alpha_type_7 5..213 CDD:239724 36/187 (19%)
Prosbeta4R2NP_001259950.1 PRE1 1..194 CDD:223711 39/197 (20%)
proteasome_beta_type_2 3..194 CDD:239727 39/197 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441077
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11599
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.930

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