DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T1 and Prosbeta4R1

DIOPT Version :9

Sequence 1:NP_650910.1 Gene:Prosalpha4T1 / 42457 FlyBaseID:FBgn0265606 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_608698.2 Gene:Prosbeta4R1 / 33449 FlyBaseID:FBgn0031442 Length:215 Species:Drosophila melanogaster


Alignment Length:205 Identity:48/205 - (23%)
Similarity:79/205 - (38%) Gaps:38/205 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 TAVGVRGANCVVLGVE-KSSVSEMQEDRTVRKISMLDRHVALAFAGLTADAR-----ILINRGQV 91
            |.:||:|.:.::|..: ..:.|.|..|..|||...:..:..::.||...|..     ||.|....
  Fly     3 TILGVKGTDFIILASDTMRNKSAMWLDDEVRKTHRISDYCMMSTAGDGGDCLKFSDFILRNMDLY 67

  Fly    92 E-CQSHRLNFENQVTLEYITRYL-AQLKQKYTQCNGRRPFGISCLIGGIDADGSARLFHTEPSGI 154
            : ...:.|.....|  .:|.|:| |.||...|       |.:|.|:||.|......|.:.:..|.
  Fly    68 KITNGYDLTVRGAV--HFIRRHLSAYLKSDCT-------FQVSLLVGGYDLTSGPELHYIDYLGN 123

  Fly   155 FHEYKATATGRWANTVREFFEKAY-------SDHEVTTKCDAIKLAMRALLE------------- 199
            ....:....|...|......|:.|       :.::|..|| .|:|..|.::.             
  Fly   124 SVPVRYGGHGAAMNFCTPILEEFYKPDMDTQAAYDVIKKC-VIELYKRFVINLRNIDLFLISKNG 187

  Fly   200 VTQMSQMRLE 209
            :|:|:.:.||
  Fly   188 ITKMNSINLE 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T1NP_650910.1 PRK03996 5..239 CDD:235192 48/205 (23%)
proteasome_alpha_type_7 5..213 CDD:239724 48/205 (23%)
Prosbeta4R1NP_608698.2 PRE1 1..204 CDD:223711 48/205 (23%)
proteasome_beta_type_2 1..193 CDD:239727 46/199 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441076
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11599
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.930

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