DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T1 and psmb8a

DIOPT Version :9

Sequence 1:NP_650910.1 Gene:Prosalpha4T1 / 42457 FlyBaseID:FBgn0265606 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_571467.3 Gene:psmb8a / 30666 ZFINID:ZDB-GENE-990415-141 Length:271 Species:Danio rerio


Alignment Length:166 Identity:35/166 - (21%)
Similarity:71/166 - (42%) Gaps:32/166 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 GSTAVGVRGANCVVLGVE-KSSVSEMQEDRTVRKISMLDRHVALAFAGLTADA----RILINRGQ 90
            |:|.:..:..:.|::.|: ::|..:....:...|:..::.::....:|..||.    |:|..   
Zfish    67 GTTTLAFKFRHGVIVAVDSRASAGKYIASKEANKVIEINPYLLGTMSGSAADCQYWERLLAK--- 128

  Fly    91 VECQSHRLNFENQVTLEYITRYLAQLKQKYTQCNGRRPFGIS--CLIGGIDADG----------- 142
             ||:.::|..:.::::...::.|:.:...|      |..|:|  .:|.|.|..|           
Zfish   129 -ECRLYKLRNKQRISVSAASKLLSNMMLGY------RGMGLSMGSMICGWDKQGPGLYYVDDNGT 186

  Fly   143 --SARLFHTEPSGIFHEYKATATG-RWANTVREFFE 175
              |.|:|.| ..|..:.|....:| |...||.|.:|
Zfish   187 RLSGRMFST-GCGNSYAYGVVDSGYREDMTVEEAYE 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T1NP_650910.1 PRK03996 5..239 CDD:235192 35/166 (21%)
proteasome_alpha_type_7 5..213 CDD:239724 35/166 (21%)
psmb8aNP_571467.3 PTZ00488 37..266 CDD:185666 35/166 (21%)
proteasome_beta_type_5 68..255 CDD:239730 34/165 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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