DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T1 and Psmb2

DIOPT Version :10

Sequence 1:NP_650910.1 Gene:Prosalpha4T1 / 42457 FlyBaseID:FBgn0265606 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_036100.3 Gene:Psmb2 / 26445 MGIID:1347045 Length:201 Species:Mus musculus


Alignment Length:181 Identity:36/181 - (19%)
Similarity:71/181 - (39%) Gaps:33/181 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 VGVRGANCVVLG---VEKSSVSEMQEDRTVRKISMLDRHVALAFAGLTADARILINRGQVECQSH 96
            :|::|.:.|::.   |..|::.:|::|..  |:..:...:.|...|...|........|...|.:
Mouse     5 IGIQGPDYVLVASDRVAASNIVQMKDDHD--KMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQLY 67

  Fly    97 RL--NFENQVT--LEYITRYLAQLKQKYTQC-NGRRPFGISCLIGGIDADGSARLFHTEPSGIFH 156
            ::  .:|...|  ..:..|.||       .| ..|.|:.::.|:.|.|.       |..|:..:.
Mouse    68 KMRNGYELSPTAAANFTRRNLA-------DCLRSRTPYHVNLLLAGYDE-------HEGPALYYM 118

  Fly   157 EYKA-------TATGRWANTVREFFEKAYSDHEVTTKCDAIKLAMRALLEV 200
            :|.|       .|.|..|.......::.|:  ...::..|::|..:.|.|:
Mouse   119 DYLAALAKAPFAAHGYGAFLTLSILDRYYT--PTISRERAVELLRKCLEEL 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T1NP_650910.1 proteasome_alpha_type_7 5..213 CDD:239724 36/181 (20%)
Psmb2NP_036100.3 proteasome_beta_type_2 1..192 CDD:239727 36/181 (20%)

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