DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T1 and Psma6

DIOPT Version :10

Sequence 1:NP_650910.1 Gene:Prosalpha4T1 / 42457 FlyBaseID:FBgn0265606 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_036098.1 Gene:Psma6 / 26443 MGIID:1347006 Length:246 Species:Mus musculus


Alignment Length:246 Identity:64/246 - (26%)
Similarity:129/246 - (52%) Gaps:15/246 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SSRYGRALTIFSPDGHLLQVEYAQEAVRKGS-TAVGVRGANCVVLGVEKSSVSEMQEDRTVRKIS 65
            |:.:.|.:|||||:|.|.|||||.:|:.:|. |:|.|||.:|.|:..:|....::.:..||..:.
Mouse     6 SAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLF 70

  Fly    66 MLDRHVALAFAGLTADARILINRGQVECQSHRLNFENQVTLEYITRYLAQLKQKYTQCNGRRPFG 130
            .:...:.....|:|||:|..:.|.:.|..:.:..:..::.::.:.:.:|.:.|.|||....||.|
Mouse    71 KITESIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLG 135

  Fly   131 ISCLIGGIDADGSARLFHTEPSGIFHEYKATATGRWANTVREFFEKAYSDHEVTTKCD-----AI 190
            ...::.|||.:...:::..:|:|.:..:||||.|     |::....::.:.:|..|.|     .:
Mouse   136 CCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAG-----VKQTESTSFLEKKVKKKFDWTFEQTV 195

  Fly   191 KLAMRALLEVTQM----SQMRLEVAVLENGKPMKMLDSVVISEIVKIVQNE 237
            :.|:..|..|..:    |::.:.|..:||.|...:.::.:.:.:|.:.:.:
Mouse   196 ETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLVALAERD 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T1NP_650910.1 proteasome_alpha_type_7 5..213 CDD:239724 59/217 (27%)
Psma6NP_036098.1 proteasome_alpha_type_6 8..220 CDD:239723 58/216 (27%)

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