DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T1 and Psma5

DIOPT Version :9

Sequence 1:NP_650910.1 Gene:Prosalpha4T1 / 42457 FlyBaseID:FBgn0265606 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_036097.1 Gene:Psma5 / 26442 MGIID:1347009 Length:241 Species:Mus musculus


Alignment Length:237 Identity:80/237 - (33%)
Similarity:136/237 - (57%) Gaps:10/237 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SRYGRALTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKSSVSEMQEDRTVRKISML 67
            |.|.|.:..|||:|.|.|||||.||::.||||:|::.:..|.|.|||...|.:.|..::.||..:
Mouse     6 SEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEI 70

  Fly    68 DRHVALAFAGLTADARILINRGQVECQSHRLNFENQVTLEYITRYLAQLKQKYTQCNG-----RR 127
            |.|:..|.:||.|||:.||::.:||.|:|...:...:|:|.:|:.::.|..::.:.:.     .|
Mouse    71 DAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSR 135

  Fly   128 PFGISCLIGGIDADGSARLFHTEPSGIFHEYKATATGRWANTVREFFEKAYSDHEVTTKCDAIKL 192
            |||::.|.||:|..| .:|||.:|||.|.:..|.|.|..:...:...::.|  |:..|..:|||.
Mouse   136 PFGVALLFGGVDEKG-PQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVY--HKSMTLKEAIKS 197

  Fly   193 AMRALLEVTQ--MSQMRLEVAVLENGKPMKMLDSVVISEIVK 232
            ::..|.:|.:  ::...:|:|.::.|:...|.....:.|::|
Mouse   198 SLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVIK 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T1NP_650910.1 PRK03996 5..239 CDD:235192 79/235 (34%)
proteasome_alpha_type_7 5..213 CDD:239724 75/214 (35%)
Psma5NP_036097.1 proteasome_alpha_type_5 8..220 CDD:239722 75/214 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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