DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T1 and pre6

DIOPT Version :9

Sequence 1:NP_650910.1 Gene:Prosalpha4T1 / 42457 FlyBaseID:FBgn0265606 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_595165.1 Gene:pre6 / 2540175 PomBaseID:SPBC106.16 Length:259 Species:Schizosaccharomyces pombe


Alignment Length:248 Identity:123/248 - (49%)
Similarity:177/248 - (71%) Gaps:3/248 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SRYGRALTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKSSVSEMQEDRTVRKISML 67
            |.|.|||::|||||.||||||.|||||:|:||:.:||..|:|:|||:.:|.::|.....:||:|:
pombe     2 SGYDRALSVFSPDGRLLQVEYGQEAVRRGTTAIALRGNECIVIGVERKNVPKLQNVSNFQKIAMV 66

  Fly    68 DRHVALAFAGLTADARILINRGQVECQSHRLNFENQVTLEYITRYLAQLKQKYTQCNGRRPFGIS 132
            |.||.||||||.|||||||::.:||.|:|:||..:.|::||:|||:|.::|||||..|.||||:|
pombe    67 DNHVCLAFAGLNADARILIDKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQSGGVRPFGVS 131

  Fly   133 CLIGGID-ADGSARLFHTEPSGIFHEYKATATGRWANTVREFFEKAYSDHEVTTKCDAIKLAMRA 196
            .||.|.| .|.:.|::.|||:||::.:||||.||.:...||:.||.:.  |..::.:.|.||:.:
pombe   132 TLIAGFDVGDNTPRVYQTEPAGIYNAWKATAIGRASKAAREYLEKNWK--EGLSRDETIHLAVSS 194

  Fly   197 LLEVTQMSQMRLEVAVLENGKPMKMLDSVVISEIVKIVQNEKELQAKAHKMKR 249
            ||||.|.:...:|:|:::.||.::.|.|..|..|||.:|:|||.:|...|..|
pombe   195 LLEVVQTASGNIELAIMDPGKDVEFLHSDKIDTIVKEIQDEKEAEAARKKSGR 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T1NP_650910.1 PRK03996 5..239 CDD:235192 117/234 (50%)
proteasome_alpha_type_7 5..213 CDD:239724 107/208 (51%)
pre6NP_595165.1 PRK03996 1..232 CDD:235192 116/231 (50%)
proteasome_alpha_type_7 4..211 CDD:239724 107/208 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 201 1.000 Domainoid score I650
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2086
Inparanoid 1 1.050 265 1.000 Inparanoid score I730
OMA 1 1.010 - - QHG62217
OrthoFinder 1 1.000 - - FOG0002043
OrthoInspector 1 1.000 - - otm47071
orthoMCL 1 0.900 - - OOG6_101207
Panther 1 1.100 - - O PTHR11599
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1345
TreeFam 1 0.960 - -
1312.830

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