DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T1 and Psmb10

DIOPT Version :10

Sequence 1:NP_650910.1 Gene:Prosalpha4T1 / 42457 FlyBaseID:FBgn0265606 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_038668.2 Gene:Psmb10 / 19171 MGIID:1096380 Length:273 Species:Mus musculus


Alignment Length:196 Identity:44/196 - (22%)
Similarity:76/196 - (38%) Gaps:31/196 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 HLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKSSVSE-MQEDRTVRKISMLDRHVALAFAGLTA 80
            |:|.......|.:.|:|..|:...:.|:||.:..:.:: :..|::..||..:...:....||:.|
Mouse    25 HVLPGLRVPHARKTGTTIAGLVFRDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAA 89

  Fly    81 DARILINRGQVECQSHRLNFENQVTLEYITRYLAQLKQKYTQCNGRRPFGISCLIGGIDADGSAR 145
            |..:.......:.:.|.|:...:..:..:||.|.|...:|     :...|.|.::||:|.:| .:
Mouse    90 DTEMTTRMAASKMELHALSTGREPRVATVTRILRQTLFRY-----QGHVGASLVVGGVDLNG-PQ 148

  Fly   146 LFHTEPSGIFHEYKATATGRWANTVREFFEKAYSDHEVTTKCDAIKLAMRALLEVTQMSQMRLEV 210
            |:...|.|.:.....||.|....                        |..||||......|.||.
Mouse   149 LYEVHPHGSYSRLPFTALGSGQG------------------------AAVALLEDRFQPNMTLEA 189

  Fly   211 A 211
            |
Mouse   190 A 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T1NP_650910.1 proteasome_alpha_type_7 5..213 CDD:239724 44/196 (22%)
Psmb10NP_038668.2 proteasome_beta_type_7 40..226 CDD:239732 40/181 (22%)
Pr_beta_C 231..267 CDD:463597
Blue background indicates that the domain is not in the aligned region.

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