DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42322 and Slc35f3

DIOPT Version :10

Sequence 1:NP_732549.2 Gene:CG42322 / 42455 FlyBaseID:FBgn0259222 Length:743 Species:Drosophila melanogaster
Sequence 2:NP_001418896.1 Gene:Slc35f3 / 679321 RGDID:1589548 Length:490 Species:Rattus norvegicus


Alignment Length:497 Identity:135/497 - (27%)
Similarity:214/497 - (43%) Gaps:121/497 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 QQDPNEVVIIPADTPTSAP-----GSHNAAHHFGGGDSSDTQTEQQQANGHGEESELRFRKLQAC 150
            ::.|.|.   |......||     |...:.||:                                
  Rat    96 EERPREP---PGPAEAQAPAGTEAGGRTSRHHW-------------------------------- 125

  Fly   151 KESCCSELARKMYFGVCVTILMTASWVGATHCIKYMYKYRAPYDDLLNDDQDTSSSRADLSTELE 215
              :|..|..||:::||.|...:.|||.|:|...:..:|                           
  Rat   126 --TCSQEQLRKVFWGVAVVFCVCASWSGSTQLARLTFK--------------------------- 161

  Fly   216 DILAISDSSLHHVEDATEMFNIPPRQPVYFSAPFFAAWFFTNFSLLFFPIYLLGLV--STRKCEK 278
                                        .|.|||...||.||::.||||:|..|.|  ||.| :.
  Rat   162 ----------------------------TFDAPFTLTWFATNWNFLFFPLYYAGHVCKSTEK-QS 197

  Fly   279 LSDILGDVLRGFRERGFTVGRFLNRCLCFCILWLVTTYLYTLSLHVLYATDALALFATNVACVYL 343
            :.....:..|.|.:.|.|:..|..:...|.:||.:|.|||..::..:.|||...||..|.:.|:|
  Rat   198 VKQRYRECCRFFGDNGLTLKVFFTKAAPFGVLWTLTNYLYLHAIKKINATDVSVLFCCNKSFVFL 262

  Fly   344 LSWVILHEQFVGVRIVAIILCDTGIALLAYMDGITESRTLSGVVLATLAGAGYAVFRVMFRKVMG 408
            |||::|.::|:||||||.||...||.::.|.||. .|.::.|:.|...:.:..|:::|:|:.::|
  Rat   263 LSWIVLRDRFMGVRIVAAILAIAGIVMMTYADGF-HSHSVIGIALVVGSASMSALYKVLFKLLLG 326

  Fly   409 DPPVSQIAFIFTALGFLNALLLWPVVLGLYLTGTESLTS-ESIPWNLLFAASLLLLVFHVLMQFS 472
            .....:.|...:.||..|.|.:..:.:.||.|..|...| :.|||..|...|:|||.|::::.|.
  Rat   327 SAKFGEAALFLSILGVFNILFITCIPIILYFTRVEYWNSFDDIPWGNLCGFSILLLTFNIVLNFG 391

  Fly   473 AAVTYNMFVTLGLITAVPVSGALDVILYSANFAGMKLAGVILIGIGFFLVMFPANWPDYITRLL- 536
            .||||...::||::.:|||:..:|.......|.|:::..:|:||:||.|::.|..|..::.:|| 
  Rat   392 IAVTYPTLMSLGIVLSVPVNAVVDHYTSQIVFNGVRVIAIIIIGLGFLLLLLPEEWDVWLIKLLT 456

  Fly   537 RKSVRAILRYQCCCELAEIRYAHSKHHNAGSQCEMGSRPSER 578
            |..||                  .|...|.|..::|:.|..|
  Rat   457 RLKVR------------------KKEETAESSGDLGTGPQSR 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42322NP_732549.2 RhaT 244..526 CDD:440461 101/284 (36%)
Slc35f3NP_001418896.1 DEAD-like_helicase_N <8..>49 CDD:475120
EamA 137..292 CDD:307170 62/210 (30%)
RhaT <231..>327 CDD:440461 36/96 (38%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.