DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk2 and SMK1

DIOPT Version :10

Sequence 1:NP_524420.1 Gene:Cdk2 / 42453 FlyBaseID:FBgn0004107 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_015379.1 Gene:SMK1 / 856167 SGDID:S000006258 Length:388 Species:Saccharomyces cerevisiae


Alignment Length:316 Identity:104/316 - (32%)
Similarity:155/316 - (49%) Gaps:50/316 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 IGEGTYGIV--YKARSNSTGQDVALKKIRLEGETEGVPSTAIREISLLKNLK-HPNVVQLFD--V 73
            :|:|.||.|  .|.:..|....:|:|||......|.:...||||:..:...| |.|:|.|.|  :
Yeast    44 LGKGAYGTVCSVKFKGRSPAARIAVKKISNIFNKEILLKRAIRELKFMNFFKGHKNIVNLIDLEI 108

  Fly    74 VISG--NNLYMIFEYLNMDLKKLMDKKKDVFTPQL----IKSYMHQILDAVGFCHTNRILHRDLK 132
            |.|.  :.||...|.::.||.|::..     :.||    ||.:::|||..:.:.|:..::|||||
Yeast   109 VTSSPYDGLYCYQELIDYDLAKVIHS-----SVQLSEFHIKYFLYQILCGLKYIHSADVIHRDLK 168

  Fly   133 PQNLLVDTAGKIKLADFGLARAF--------NVPMRAYTHEVVTLWYRAPEILLGTKFYSTGVDI 189
            |.|:|....|.:|:.||||||..        :......|:.|.|.||||||:||..:.||..|||
Yeast   169 PGNILCTLNGCLKICDFGLARGIHAGFFKCHSTVQPHITNYVATRWYRAPELLLSNQPYSKSVDI 233

  Fly   190 WSLGCIFSEMIMRRSLFPGDSEIDQLYRIFRTLSTPDETNWPGVTQLPDFKTKF---PRW---EG 248
            |::|||.:|...|:.:|.|...:.|::.|.:.|.|||:          |...||   ..|   :.
Yeast   234 WAVGCILAEFYARKPVFMGRDSMHQIFEIIKVLGTPDK----------DILIKFGTIKAWNLGKN 288

  Fly   249 TNMPQ----------PITEHEAHELIMSMLCYDPNLRISAKDALQHAYFRNVQHVD 294
            :|.|.          |...|||..||.|:|.:|...|::.:.|:.|.:...|:..|
Yeast   289 SNNPVYKKIPWSNIFPFASHEAINLIESLLHWDSTHRLNVEQAISHPFLNEVRKPD 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk2NP_524420.1 STKc_CDK1_CdkB_like 8..287 CDD:270829 102/307 (33%)
SMK1NP_015379.1 Protein Kinases, catalytic domain 37..376 CDD:473864 104/316 (33%)

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