DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk2 and SSN3

DIOPT Version :10

Sequence 1:NP_524420.1 Gene:Cdk2 / 42453 FlyBaseID:FBgn0004107 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_015283.1 Gene:SSN3 / 856065 SGDID:S000005963 Length:555 Species:Saccharomyces cerevisiae


Alignment Length:411 Identity:118/411 - (28%)
Similarity:189/411 - (45%) Gaps:117/411 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TILDNFQRAEKIGEGTYGIVYKA------------------------------------------ 25
            ::|:.::....|..||||.||||                                          
Yeast    70 SVLEKYEVIGYIAAGTYGKVYKAKRQINSGTNSANGSSLNGTNAKIPQFDSTQPKSSSSMDMQAN 134

  Fly    26 -----------------RSNSTGQDV--------------------ALKKIRLEGE------TEG 47
                             |..:|.:||                    |:||.:.|.:      ..|
Yeast   135 TNALRRNLLKDEGVTPGRIRTTREDVSPHYNSQKQTLIKKPLTVFYAIKKFKTEKDGVEQLHYTG 199

  Fly    48 VPSTAIREISLLKNLKHPNVVQLFDVVISGNNLYMIFEYLNMDLKKLM----DKKKDVFTPQLIK 108
            :..:|.||::|.:.|.:.::..|.::.:....::|::||...||.:::    ..:|.:..|::::
Yeast   200 ISQSACREMALCRELHNKHLTTLVEIFLERKCVHMVYEYAEHDLLQIIHFHSHPEKRMIPPRMVR 264

  Fly   109 SYMHQILDAVGFCHTNRILHRDLKPQNLLVDTAGKIKLADFGLARAF-NVPMRAYTHE--VVTLW 170
            |.|.|:||.|.:.|.|.:|||||||.|::|...|.:|:.|.||||.| |:....||.:  |||:|
Yeast   265 SIMWQLLDGVSYLHQNWVLHRDLKPANIMVTIDGCVKIGDLGLARKFHNMLQTLYTGDKVVVTIW 329

  Fly   171 YRAPEILLGTKFYSTGVDIWSLGCIFSEMIMRRSLFPGDS-----------EIDQLYRIFRTLST 224
            |||||:|||.:.|:..||:||:||||:|:|..:.:|.|:.           :::||.||...|.|
Yeast   330 YRAPELLLGARHYTPAVDLWSVGCIFAELIGLQPIFKGEEAKLDSKKTVPFQVNQLQRILEVLGT 394

  Fly   225 PDETNWPGVTQLPDFK--TKFPRWEGTNMPQPI-----TEHEAHELIMSMLCYDPNLRISAKDAL 282
            ||:..||.:.:.|::.  ||||::. .|:....     .:..|..|:..:|.|||..||.|.:||
Yeast   395 PDQKIWPYLEKYPEYDQITKFPKYR-DNLATWYHSAGGRDKHALSLLYHLLNYDPIKRIDAFNAL 458

  Fly   283 QHAYFRNVQHVDHVALPVDPN 303
            :|.||....      :||..|
Yeast   459 EHKYFTESD------IPVSEN 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk2NP_524420.1 STKc_CDK1_CdkB_like 8..287 CDD:270829 112/388 (29%)
SSN3NP_015283.1 STKc_CDK8_like 74..463 CDD:270834 112/389 (29%)

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