DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk2 and AT1G71530

DIOPT Version :10

Sequence 1:NP_524420.1 Gene:Cdk2 / 42453 FlyBaseID:FBgn0004107 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_177308.3 Gene:AT1G71530 / 843493 AraportID:AT1G71530 Length:655 Species:Arabidopsis thaliana


Alignment Length:316 Identity:118/316 - (37%)
Similarity:170/316 - (53%) Gaps:37/316 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DNFQRAEKIGEGTYGIVYKARSNSTGQDVALKKIR-LEGETEGVPSTAIREISLLKNLKHPNVVQ 69
            ::|::.:|||:|||..|||||...||:.||:||:| :..:.|.|...| |||.:|:.|.||||::
plant   145 ESFEKLDKIGQGTYSSVYKARDLETGKIVAMKKVRFVNMDPESVRFMA-REILILRKLDHPNVMK 208

  Fly    70 LFDVVIS--GNNLYMIFEYLNMDLKKLMDKKKDVFTPQLIKSYMHQILDAVGFCHTNRILHRDLK 132
            |..:|.|  ..:||::|||:..||..|.......|:...||.||.|:...:..||...|||||:|
plant   209 LEGLVTSRLSGSLYLVFEYMEHDLAGLAATPGIKFSEPQIKCYMQQLFRGLEHCHRRGILHRDIK 273

  Fly   133 PQNLLVDTAGKIKLADFGLARAFNVPMRA-----YTHEVVTLWYRAPEILLGTKFYSTGVDIWSL 192
            ..|||::..|.:|:.|||||..:    |.     .|..||||||||||:|||...|...:|:||.
plant   274 GSNLLINNEGVLKIGDFGLANFY----RGDGDLQLTSRVVTLWYRAPELLLGATEYGPAIDLWSA 334

  Fly   193 GCIFSEMIMRRSLFPGDSEIDQLYRIFRTLSTPDETNWPGVTQLP---DFKTKFPRWEGTNMPQP 254
            |||.:|:...:.:.||.:|::|:::||:...:|.|..|...| ||   .||...|.       :|
plant   335 GCILTELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRRAT-LPLATSFKPSHPY-------KP 391

  Fly   255 ITEH-------EAHELIMSMLCYDPNLRISAKDALQHAYFRNVQHVDHVALPVDPN 303
            :...       .|..||..:|..:|..|.||...|:..:|..      ..||.:|:
plant   392 VLAETFNHFPSSALMLINKLLAIEPEKRGSAASTLRSEFFTT------EPLPANPS 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk2NP_524420.1 STKc_CDK1_CdkB_like 8..287 CDD:270829 114/296 (39%)
AT1G71530NP_177308.3 STKc_CDK9_like 147..431 CDD:270832 114/296 (39%)

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