DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk2 and AT1G67580

DIOPT Version :10

Sequence 1:NP_524420.1 Gene:Cdk2 / 42453 FlyBaseID:FBgn0004107 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_176925.1 Gene:AT1G67580 / 843079 AraportID:AT1G67580 Length:752 Species:Arabidopsis thaliana


Alignment Length:300 Identity:138/300 - (46%)
Similarity:199/300 - (66%) Gaps:16/300 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LDNFQRAEKIGEGTYGIVYKARSNSTGQDVALKKIRLEGETEGVPSTAIREISLLKNLKHPNVVQ 69
            :|.|:|..||.|||||:||:|:...||:.|||||:::|.|.||.|.|::|||::|.:..||::|.
plant   403 VDEFERLNKIDEGTYGVVYRAKDKKTGEIVALKKVKMEKEREGFPLTSLREINILLSFHHPSIVD 467

  Fly    70 LFDVVI--SGNNLYMIFEYLNMDLKKLMDKKKDVFTPQLIKSYMHQILDAVGFCHTNRILHRDLK 132
            :.:||:  |.::::|:.||:..|||.||:..|..|:...:|..|.|:|:.|.:.|.|.:||||||
plant   468 VKEVVVGSSLDSIFMVMEYMEHDLKALMETMKQRFSQSEVKCLMLQLLEGVKYLHDNWVLHRDLK 532

  Fly   133 PQNLLVDTAGKIKLADFGLARAFNVPMRAYTHEVVTLWYRAPEILLGTKFYSTGVDIWSLGCIFS 197
            ..|||::..|::|:.||||||.:..|::.|||.||||||||||:|||.|.|||.:|:||||||.:
plant   533 TSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGAKQYSTAIDMWSLGCIMA 597

  Fly   198 EMIMRRSLFPGDSEIDQLYRIFRTLSTPDETNWPGVTQLPDFKT------------KFPRWEGTN 250
            |::|:..||.|.:|.|||.:|||.|.||:|:.|||.::||..|.            |||....|.
plant   598 ELLMKAPLFNGKTEFDQLDKIFRILGTPNESIWPGFSKLPGVKVNFVKHQYNLLRKKFPATSFTG 662

  Fly   251 MPQPITEHEAHELIMSMLCYDPNLRISAKDALQHAYFRNV 290
              .|:......:|:..:|.|||..||:..:||:|.:||.|
plant   663 --APVLSDAGFDLLNKLLTYDPERRITVNEALKHDWFREV 700

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk2NP_524420.1 STKc_CDK1_CdkB_like 8..287 CDD:270829 134/292 (46%)
AT1G67580NP_176925.1 STKc_CDC2L1 400..697 CDD:173741 135/295 (46%)

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