DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk2 and AT1G54610

DIOPT Version :10

Sequence 1:NP_524420.1 Gene:Cdk2 / 42453 FlyBaseID:FBgn0004107 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_175862.1 Gene:AT1G54610 / 841903 AraportID:AT1G54610 Length:572 Species:Arabidopsis thaliana


Alignment Length:315 Identity:120/315 - (38%)
Similarity:178/315 - (56%) Gaps:30/315 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DNFQRAEKIGEGTYGIVYKARSNSTGQDVALKKIRLEG-ETEGVPSTAIREISLLKNLKHPNVVQ 69
            |.|::.:|||:|||..||||:...||:.|||||:|.:. |.|.|...| |||.:|:.|.|||||:
plant   116 DTFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMA-REILVLRRLDHPNVVK 179

  Fly    70 LFDVVIS--GNNLYMIFEYLNMDLKKLMDKKKDVFTPQLIKSYMHQILDAVGFCHTNRILHRDLK 132
            |..:|.|  ..:||::|:|::.||..|.......|:...:|..|.|::..:..||:..:||||:|
plant   180 LEGLVTSRMSCSLYLVFQYMDHDLAGLASSPVVKFSESEVKCLMRQLISGLEHCHSRGVLHRDIK 244

  Fly   133 PQNLLVDTAGKIKLADFGLARAFNVP--MRAYTHEVVTLWYRAPEILLGTKFYSTGVDIWSLGCI 195
            ..|||:|..|.:|:||||||..|: |  .|..|..||||||||||:|||...|..|:|:||.|||
plant   245 GSNLLIDDGGVLKIADFGLATIFD-PNHKRPMTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCI 308

  Fly   196 FSEMIMRRSLFPGDSEIDQLYRIFRTLSTPDETNWP------GVTQLP------DFKTKFPRWEG 248
            .:|::..|.:.||.:|::||::|::...:|.|..|.      |....|      ..:..|..:..
plant   309 LAELLAGRPIMPGRTEVEQLHKIYKLCGSPSEDYWKKGKFTHGAIYKPREPYKRSIRETFKDFPP 373

  Fly   249 TNMPQPITEHEAHELIMSMLCYDPNLRISAKDALQHAYFRNVQHVDHVA-LPVDP 302
            :::|          ||.::|..:|..|.:|..||:..:|.:..:....| ||..|
plant   374 SSLP----------LIDALLSIEPEDRQTASAALKSEFFTSEPYACEPADLPKYP 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk2NP_524420.1 STKc_CDK1_CdkB_like 8..287 CDD:270829 114/295 (39%)
AT1G54610NP_175862.1 STKc_CDK9_like 118..402 CDD:270832 114/295 (39%)

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