DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk2 and AT1G53050

DIOPT Version :10

Sequence 1:NP_524420.1 Gene:Cdk2 / 42453 FlyBaseID:FBgn0004107 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_175713.1 Gene:AT1G53050 / 841739 AraportID:AT1G53050 Length:694 Species:Arabidopsis thaliana


Alignment Length:312 Identity:122/312 - (39%)
Similarity:180/312 - (57%) Gaps:27/312 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DNFQRAEKIGEGTYGIVYKARSNSTGQDVALKKIRLEG-ETEGVPSTAIREISLLKNLKHPNVVQ 69
            |:|::.:|||:|||..||:||.....:.|||||:|.:. |.|.|...| |||.:|:.|.|||:::
plant   132 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIQILRRLDHPNIIK 195

  Fly    70 LFDVVIS--GNNLYMIFEYLNMDLKKLMDKKKDVFTPQLIKSYMHQILDAVGFCHTNRILHRDLK 132
            |..:|.|  ..:||::|||:..||..|.......|:...:|.|:.|:|..:..||:..:||||:|
plant   196 LEGLVTSRMSCSLYLVFEYMEHDLAGLASHPAIKFSESQVKCYLQQLLHGLDHCHSRGVLHRDIK 260

  Fly   133 PQNLLVDTAGKIKLADFGLARAFNVPMRA--YTHEVVTLWYRAPEILLGTKFYSTGVDIWSLGCI 195
            ..|||:|.:|.:|:||||||..|: |.:.  .|..|||||||.||:|||...|...||:||.|||
plant   261 GSNLLIDNSGVLKIADFGLASFFD-PRQTQPLTSRVVTLWYRPPELLLGATRYGAAVDLWSAGCI 324

  Fly   196 FSEMIMRRSLFPGDSEIDQLYRIFRTLSTPDETNWPGVTQLPD---FKTKFP--RWEG---TNMP 252
            .:|:...:.:.||.:|::||::||:...:|.|..|. .::||.   ||...|  |..|   ...|
plant   325 LAELYAGKPIMPGRTEVEQLHKIFKLCGSPTEDYWV-KSRLPHATIFKPTQPYKRLVGETFKEFP 388

  Fly   253 QPITEHEAHELIMSMLCYDPNLRISAKDALQHAYFRNVQHVDHVALPVDPNA 304
            ||     |..|:.::|..:|:.|.:|..||:..:|..      ..||.||::
plant   389 QP-----ALALLETLLSVNPDDRGTATAALKSEFFST------RPLPCDPSS 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk2NP_524420.1 STKc_CDK1_CdkB_like 8..287 CDD:270829 116/291 (40%)
AT1G53050NP_175713.1 STKc_CDK9_like 134..418 CDD:270832 116/291 (40%)

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