DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cdk2 and AT1G33770

DIOPT Version :10

Sequence 1:NP_524420.1 Gene:Cdk2 / 42453 FlyBaseID:FBgn0004107 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_174637.1 Gene:AT1G33770 / 840268 AraportID:AT1G33770 Length:614 Species:Arabidopsis thaliana


Alignment Length:312 Identity:117/312 - (37%)
Similarity:175/312 - (56%) Gaps:24/312 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DNFQRAEKIGEGTYGIVYKARSNSTGQDVALKKIRLEG-ETEGVPSTAIREISLLKNLKHPNVVQ 69
            |:|::.:|||:|||.||||||...||:.||:||:|... :.|.|...| |||::|:.|.||||::
plant   139 DSFEKLDKIGQGTYSIVYKARDLETGKIVAMKKVRFANMDPESVRFMA-REINILRKLDHPNVMK 202

  Fly    70 LFDVVIS--GNNLYMIFEYLNMDLKKLMDKKKDVFTPQLIKSYMHQILDAVGFCHTNRILHRDLK 132
            |..:|.|  ..:|:::|||:..||..|..:....||...||.:|.|:|..:..||:..|||||:|
plant   203 LQCLVTSKLSGSLHLVFEYMEHDLSGLALRPGVKFTEPQIKCFMKQLLCGLEHCHSRGILHRDIK 267

  Fly   133 PQNLLVDTAGKIKLADFGLARAFNVPM-RAYTHEVVTLWYRAPEILLGTKFYSTGVDIWSLGCIF 196
            ..||||:..|.:|:.|||||..:.... :..|..||||||||||:|||:..|...:|:||:|||.
plant   268 GSNLLVNNDGVLKIGDFGLASFYKPDQDQPLTSRVVTLWYRAPELLLGSTEYGPAIDLWSVGCIL 332

  Fly   197 SEMIMRRSLFPGDSEIDQLYRIFRTLSTPDETNWPGVTQLPDFKTKFPRWEGTNMPQPI------ 255
            :|:.:.:.:.||.:|::|:::||:...:|.|..|.        .||||:........|.      
plant   333 AELFVCKPIMPGRTEVEQMHKIFKLCGSPSEEFWN--------TTKFPQATSYKPQHPYKRVLLE 389

  Fly   256 ----TEHEAHELIMSMLCYDPNLRISAKDALQHAYFRNVQHVDHV-ALPVDP 302
                ....:.:|:..:|..:|..|.||...|...:|.......|: :||..|
plant   390 TFKNLSSSSLDLLDKLLSVEPEKRCSASSTLLSEFFTTEPLPCHISSLPKYP 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk2NP_524420.1 STKc_CDK1_CdkB_like 8..287 CDD:270829 111/292 (38%)
AT1G33770NP_174637.1 STKc_CDK9_like 141..425 CDD:270832 111/292 (38%)

Return to query results.
Submit another query.