DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk2 and IBS1

DIOPT Version :10

Sequence 1:NP_524420.1 Gene:Cdk2 / 42453 FlyBaseID:FBgn0004107 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_001321211.1 Gene:IBS1 / 838448 AraportID:AT1G18670 Length:720 Species:Arabidopsis thaliana


Alignment Length:314 Identity:118/314 - (37%)
Similarity:180/314 - (57%) Gaps:29/314 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DNFQRAEKIGEGTYGIVYKARSNSTGQDVALKKIRLEG-ETEGVPSTAIREISLLKNLKHPNVVQ 69
            |.|::.||||:|||..|::||...||:.|||||:|.:. |.|.|...| |||.:|:.|.|||:::
plant   129 DAFEKLEKIGQGTYSSVFRARETETGRIVALKKVRFDNFEPESVRFMA-REILILRKLNHPNIIK 192

  Fly    70 LFDVVIS--GNNLYMIFEYLNMDLKKLMDKKKDVFTPQLIKSYMHQILDAVGFCHTNRILHRDLK 132
            |..:|.|  ..:::::|||:..||..|:......||...||.||.|:|..:..||...::|||:|
plant   193 LEGIVTSKLSCSIHLVFEYMEHDLTGLLSSPDIDFTTPQIKCYMKQLLSGLDHCHARGVMHRDIK 257

  Fly   133 PQNLLVDTAGKIKLADFGLARAFNVP--MRAYTHEVVTLWYRAPEILLGTKFYSTGVDIWSLGCI 195
            ..||||:..|.:|:||||||...|..  .:..|..|||||||.||:|||...|...||:||:||:
plant   258 GSNLLVNNEGILKVADFGLANFCNASGNKQPLTSRVVTLWYRPPELLLGATEYGASVDLWSVGCV 322

  Fly   196 FSEMIMRRSLFPGDSEIDQLYRIFRTLSTPDETNWPGVTQLPDFKTKFP---------RWEG--- 248
            |:|:::.:.:..|.:|::||::||:...:|.|..|.        |:|.|         .::|   
plant   323 FAELLIGKPVLQGRTEVEQLHKIFKLCGSPPEDYWK--------KSKLPHAMLFKPQQHYDGCLR 379

  Fly   249 -TNMPQPITEHEAHELIMSMLCYDPNLRISAKDALQHAYFRNVQHV-DHVALPV 300
             |...:.:::.:.: ||.::|...|:.|.:|..||...||.:.... |..:|||
plant   380 ETLKLKGLSDADIN-LIETLLSIQPHKRGTASTALVSQYFTSKPFACDPSSLPV 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk2NP_524420.1 STKc_CDK1_CdkB_like 8..287 CDD:270829 111/296 (38%)
IBS1NP_001321211.1 STKc_CDK9_like 131..418 CDD:270832 111/296 (38%)

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