DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk2 and AT1G09600

DIOPT Version :10

Sequence 1:NP_524420.1 Gene:Cdk2 / 42453 FlyBaseID:FBgn0004107 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_172431.1 Gene:AT1G09600 / 837487 AraportID:AT1G09600 Length:714 Species:Arabidopsis thaliana


Alignment Length:288 Identity:110/288 - (38%)
Similarity:161/288 - (55%) Gaps:7/288 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DNFQRAEKIGEGTYGIVYKARSNSTGQDVALKKIRLEGETEGVPSTAIREISLLKNLKHPNVVQL 70
            |:|::.||||:|||..|||||...|.|.|||||:|.............|||.:|:.|.||||::|
plant   161 DSFEKLEKIGQGTYSSVYKARDLETNQLVALKKVRFANMDPDSVRFMAREIIILRRLDHPNVMKL 225

  Fly    71 FDVVIS--GNNLYMIFEYLNMDLKKLMDKKKDVFTPQLIKSYMHQILDAVGFCHTNRILHRDLKP 133
            ..::.|  ..::|:||||:..||..|.......|:...||.||.|:|..:..||:..:||||:|.
plant   226 EGLITSRVSGSMYLIFEYMEHDLAGLASTPGINFSEAQIKCYMKQLLHGLEHCHSRGVLHRDIKG 290

  Fly   134 QNLLVDTAGKIKLADFGLARAFNVPMR-AYTHEVVTLWYRAPEILLGTKFYSTGVDIWSLGCIFS 197
            .|||:|....:|:.|||||..:....: ..|..|||||||.||:|||:..|...||:||.|||.:
plant   291 SNLLLDHNNNLKIGDFGLANFYQGHQKQPLTSRVVTLWYRPPELLLGSTDYGVTVDLWSTGCILA 355

  Fly   198 EMIMRRSLFPGDSEIDQLYRIFRTLSTPDETNWPGVTQLPD---FKTKFPRWEGTNMPQPITEHE 259
            |:...:.:.||.:|::||::||:...:|.|..|. :::||.   ||.:.|...............
plant   356 ELFTGKPIMPGRTEVEQLHKIFKLCGSPSEEYWK-ISKLPHATIFKPQQPYKRCVAETFKSLPSS 419

  Fly   260 AHELIMSMLCYDPNLRISAKDALQHAYF 287
            |..|:..:|..:|:.|.:...||:..:|
plant   420 ALALVEVLLAVEPDARGTTASALESEFF 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk2NP_524420.1 STKc_CDK1_CdkB_like 8..287 CDD:270829 108/284 (38%)
AT1G09600NP_172431.1 STKc_CDK9_like 163..447 CDD:270832 108/284 (38%)

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