DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cdk2 and CDKE;1

DIOPT Version :10

Sequence 1:NP_524420.1 Gene:Cdk2 / 42453 FlyBaseID:FBgn0004107 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_201166.1 Gene:CDKE;1 / 836481 AraportID:AT5G63610 Length:470 Species:Arabidopsis thaliana


Alignment Length:352 Identity:129/352 - (36%)
Similarity:195/352 - (55%) Gaps:62/352 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LDNFQRAEKIGEGTYGIVYKARSNS-TGQDVALKKIRLEGETEGVPSTAIREISLLKNLKHPNVV 68
            |..:....||||||||:|:.||:.: ..:.:|:||.:...:.:||..||||||.||:.:.|.|||
plant    22 LQQYNLVGKIGEGTYGLVFLARTKTPPKRPIAIKKFKQSKDGDGVSPTAIREIMLLREISHENVV 86

  Fly    69 QLFDVVI--SGNNLYMIFEYLNMDLKKLM----DKKKDVFTPQLIKSYMHQILDAVGFCHTNRIL 127
            :|.:|.|  :..:||:.|:|...||.:::    ||.........:||.:.|:|:.:.:.|:|.|:
plant    87 KLVNVHINFADMSLYLAFDYAEYDLYEIIRHHRDKVGHSLNTYTVKSLLWQLLNGLNYLHSNWII 151

  Fly   128 HRDLKPQNLLV----DTAGKIKLADFGLARAFNVPMRAYTHE--VVTLWYRAPEILLGTKFYSTG 186
            ||||||.|:||    :..|.:|:|||||||.:..|::..:..  |||:||||||:|||:|.|::.
plant   152 HRDLKPSNILVMGDAEEHGIVKIADFGLARIYQAPLKPLSDNGVVVTIWYRAPELLLGSKHYTSA 216

  Fly   187 VDIWSLGCIFSEMIMRRSLFPGDS--------EIDQLYRIFRTLSTPDETNWPGVTQLPDFKTKF 243
            ||:|::||||:|::..:.||.|..        ::|||.:||:.|..|....||.:..|       
plant   217 VDMWAVGCIFAELLTLKPLFQGAEAKSSQNPFQLDQLDKIFKILGHPTMDKWPTLVNL------- 274

  Fly   244 PRWEGTNMPQPITEHE-----------------AHELIMSMLCYDPNLRISAKDALQHAYF---- 287
            |.|:  |..|.|..|:                 |::|:..||.|||..||:|..||:|.||    
plant   275 PHWQ--NDVQHIQAHKYDSVGLHNVVHLNQKSPAYDLLSKMLEYDPLKRITASQALEHEYFRMDP 337

  Fly   288 ---RNV--------QHVDHVALPVDPN 303
               ||.        ::|::...|||.|
plant   338 LPGRNAFVASQPMEKNVNYPTRPVDTN 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk2NP_524420.1 STKc_CDK1_CdkB_like 8..287 CDD:270829 119/316 (38%)
CDKE;1NP_201166.1 STKc_CDK8_like 24..333 CDD:270834 119/317 (38%)

Return to query results.
Submit another query.