DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk2 and AT5G63370

DIOPT Version :10

Sequence 1:NP_524420.1 Gene:Cdk2 / 42453 FlyBaseID:FBgn0004107 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_201142.1 Gene:AT5G63370 / 836456 AraportID:AT5G63370 Length:612 Species:Arabidopsis thaliana


Alignment Length:304 Identity:135/304 - (44%)
Similarity:198/304 - (65%) Gaps:19/304 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LDNFQRAEKIGEGTYGIVYKARSNSTGQDVALKKIRLE----GETEGVPSTAIREISLLKNLKHP 65
            ::.||:..||.|||||||||||...|.:.||||||:::    .|..|.|.|::|||::|.:..||
plant   294 VNEFQKLNKINEGTYGIVYKARDEKTKEIVALKKIKMKEDRFEEEYGFPLTSLREINILLSCNHP 358

  Fly    66 NVVQLFDVVISG---NNLYMIFEYLNMDLKKLMDKKKDVFTPQLIKSYMHQILDAVGFCHTNRIL 127
            .:|.:.:||:.|   |::||:.|:|..||:.:||::|:.|:...:|..|.|:||.:.:.|||.|:
plant   359 AIVNVKEVVVGGKNDNDVYMVMEHLEHDLRGVMDRRKEPFSTSEVKCLMMQLLDGLKYLHTNWII 423

  Fly   128 HRDLKPQNLLVDTAGKIKLADFGLARAFNVPMRAYTHEVVTLWYRAPEILLGTKFYSTGVDIWSL 192
            ||||||.|||::..|::|:.|||:||.:..|::.||..|:|.|||.||:|||.|.|||.||:||:
plant   424 HRDLKPSNLLMNNCGELKICDFGMARQYGSPIKPYTQMVITQWYRPPELLLGAKEYSTAVDMWSV 488

  Fly   193 GCIFSEMIMRRSLFPGDSEIDQLYRIFRTLSTPDETNWPGVTQLPDFKTKFPRWEGTNMPQ---- 253
            |||.:|::.::.||||.||:|||.:||..|.||:|..|||.:..|:.|.|||. :..||.:    
plant   489 GCIMAELLSQKPLFPGKSELDQLQKIFAVLGTPNEAIWPGFSSFPNAKAKFPT-QPYNMLRKKFP 552

  Fly   254 -------PITEHEAHELIMSMLCYDPNLRISAKDALQHAYFRNV 290
                   .|......:|:.|:|..||..|::.:|||.|.:|..|
plant   553 AISFVGGQILSERGFDLLNSLLTLDPEKRLTVEDALNHGWFHEV 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk2NP_524420.1 STKc_CDK1_CdkB_like 8..287 CDD:270829 133/296 (45%)
AT5G63370NP_201142.1 STKc_CDC2L1 292..593 CDD:173741 133/299 (44%)

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