DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk2 and AT4G19110

DIOPT Version :10

Sequence 1:NP_524420.1 Gene:Cdk2 / 42453 FlyBaseID:FBgn0004107 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_849407.1 Gene:AT4G19110 / 827649 AraportID:AT4G19110 Length:464 Species:Arabidopsis thaliana


Alignment Length:294 Identity:104/294 - (35%)
Similarity:175/294 - (59%) Gaps:10/294 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LDNFQRAEKIGEGTYGIVYKARSNSTGQDVALKKIRLE--GETEGVPSTAIREISLLKNLKHPNV 67
            :|.::..:::|:||:|.|::|.:..||:.||:||::.:  ...|.:   .:||:..|:.:.|||:
plant     1 MDRYKLIKEVGDGTFGSVWRAINKQTGEVVAIKKMKKKYYSWDECI---NLREVKSLRRMNHPNI 62

  Fly    68 VQLFDVVISGNNLYMIFEYLNMDLKKLMDKKKDVFTPQLIKSYMHQILDAVGFCHTNRILHRDLK 132
            |:|.:|:...:.||.:|||:..:|.:||..::.:|....||::..|:...:.:.|.....|||||
plant    63 VKLKEVIRENDILYFVFEYMECNLYQLMKDRQKLFAEADIKNWCFQVFQGLSYMHQRGYFHRDLK 127

  Fly   133 PQNLLVDTAGKIKLADFGLARAFNVPMRAYTHEVVTLWYRAPEILLGTKFYSTGVDIWSLGCIFS 197
            |:|||| :...||:|||||||..| ....:|..|.|.||||||:||.:..|::.||:|::|.|.:
plant   128 PENLLV-SKDIIKIADFGLAREVN-SSPPFTEYVSTRWYRAPEVLLQSYVYTSKVDMWAMGAIMA 190

  Fly   198 EMIMRRSLFPGDSEIDQLYRIFRTLSTPDETNW-PGVTQLPDFKTKFPRWEGTNMP--QPITEHE 259
            |::..|.:|||.||.|::|:|...:.||.|..| .|:........:||:..|..:.  .|....:
plant   191 ELLSLRPIFPGASEADEIYKICSVIGTPTEETWLEGLNLANTINYQFPQLPGVPLSSLMPSASED 255

  Fly   260 AHELIMSMLCYDPNLRISAKDALQHAYFRNVQHV 293
            |..||..:..:||:.|.:|.:.|||.:|::..:|
plant   256 AINLIERLCSWDPSSRPTAAEVLQHPFFQSCFYV 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk2NP_524420.1 STKc_CDK1_CdkB_like 8..287 CDD:270829 101/283 (36%)
AT4G19110NP_849407.1 STKc_MAK_like 4..283 CDD:270824 101/283 (36%)

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