DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cdk2 and cdk4

DIOPT Version :10

Sequence 1:NP_524420.1 Gene:Cdk2 / 42453 FlyBaseID:FBgn0004107 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_001071245.2 Gene:cdk4 / 777730 ZFINID:ZDB-GENE-060929-974 Length:297 Species:Danio rerio


Alignment Length:300 Identity:133/300 - (44%)
Similarity:187/300 - (62%) Gaps:33/300 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FQRAEKIGEGTYGIVYKARSNSTGQDVALKKIRLEGETEGVPSTAIREISLLKNLK---HPNVVQ 69
            ::...:||.|.||.|||||...:||.||||.:|::...:|:|.:.:||::|||.|:   |||:|:
Zfish     9 YEPVAEIGGGAYGTVYKARDRDSGQFVALKSVRVQTNQDGLPLSTVREVALLKRLEQFDHPNIVR 73

  Fly    70 LFDVVIS-----GNNLYMIFEYLNMDLKKLMDKKKDVFTPQL----IKSYMHQILDAVGFCHTNR 125
            |.||..:     ...:.::||:::.||:..::|   |..|.|    |:..|.|:|..:.|.||||
Zfish    74 LMDVCATLRTDQETKVTLVFEHVDQDLRTYLEK---VPAPGLPVDKIRDLMQQLLCGLAFLHTNR 135

  Fly   126 ILHRDLKPQNLLVDTAGKIKLADFGLARAFNVPMRAYTHEVVTLWYRAPEILLGTKFYSTGVDIW 190
            :|||||||:|:||.:.|::|||||||||.::..| |.|..|||||||:||:||.:. |:|.||||
Zfish   136 VLHRDLKPENILVTSRGQVKLADFGLARIYSCHM-ALTPVVVTLWYRSPEVLLQST-YATPVDIW 198

  Fly   191 SLGCIFSEMIMRRSLFPGDSEIDQLYRIFRTLSTPDETNWPGVTQLP--DFKTKFPRWEGTNMPQ 253
            |.||||:||..|:.||.||||.|||.:||..:..|.|..||....|.  :|..:.||        
Zfish   199 STGCIFAEMFRRKPLFCGDSEADQLGKIFAVIGLPAEDQWPTDVTLSHHNFSPQSPR-------- 255

  Fly   254 PITE------HEAHELIMSMLCYDPNLRISAKDALQHAYF 287
            |||:      .:..||::.||.:||..||||.:||.|.:|
Zfish   256 PITDCVPDITEKGAELLLKMLTFDPLKRISALNALDHPFF 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk2NP_524420.1 STKc_CDK1_CdkB_like 8..287 CDD:270829 132/298 (44%)
cdk4NP_001071245.2 STKc_CDK4 8..295 CDD:143368 132/298 (44%)

Return to query results.
Submit another query.