DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cdk2 and Cdk12

DIOPT Version :10

Sequence 1:NP_524420.1 Gene:Cdk2 / 42453 FlyBaseID:FBgn0004107 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_001103096.1 Gene:Cdk12 / 69131 MGIID:1098802 Length:1484 Species:Mus musculus


Alignment Length:306 Identity:123/306 - (40%)
Similarity:182/306 - (59%) Gaps:24/306 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LDNFQRAEKIGEGTYGIVYKARSNSTGQDVALKKIRLEGETEGVPSTAIREISLLKNLKHPNVVQ 69
            :|.|.....|||||||.||||:...||:.|||||:||:.|.||.|.||||||.:|:.|.|.:||.
Mouse   720 VDKFDIIGIIGEGTYGQVYKAKDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLVHQSVVN 784

  Fly    70 LFDVVISGNN----------LYMIFEYLNMDLKKLMDKKKDVFTPQLIKSYMHQILDAVGFCHTN 124
            :.::|....:          .|::|||::.||..|::.....|:...|||:|.|:::.:.:||..
Mouse   785 MKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLMEGLDYCHKK 849

  Fly   125 RILHRDLKPQNLLVDTAGKIKLADFGLARAFN-VPMRAYTHEVVTLWYRAPEILLGTKFYSTGVD 188
            ..||||:|..|:|::.:|:||||||||||.:| ...|.||::|:|||||.||:|||.:.|:..:|
Mouse   850 NFLHRDIKCSNILLNNSGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYTPAID 914

  Fly   189 IWSLGCIFSEMIMRRSLFPGDSEIDQLYRIFRTLSTPDETNWPGVTQLPDFKTKFP--------R 245
            :||.|||..|:..::.:|..:.|:.||..|.|...:|....||.|.:||.|.|..|        |
Mouse   915 VWSCGCILGELFTKKPIFQANLELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLR 979

  Fly   246 WEGTNMPQPITEHEAHELIMSMLCYDPNLRISAKDALQHAYFRNVQ 291
            .|.:.:|.     .|.:|:..||..||:.|.:|:..||..:.::|:
Mouse   980 EEFSFIPS-----AALDLLDHMLTLDPSKRCTAEQTLQSDFLKDVE 1020

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk2NP_524420.1 STKc_CDK1_CdkB_like 8..287 CDD:270829 121/297 (41%)
Cdk12NP_001103096.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..465
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 483..699
STKc_CDK12 715..1016 CDD:270847 122/300 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1044..1101
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1156..1199
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1219..1363
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1437..1484
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.