DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk2 and Cdkl4

DIOPT Version :10

Sequence 1:NP_524420.1 Gene:Cdk2 / 42453 FlyBaseID:FBgn0004107 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_001419046.1 Gene:Cdkl4 / 503009 RGDID:1583704 Length:342 Species:Rattus norvegicus


Alignment Length:302 Identity:113/302 - (37%)
Similarity:176/302 - (58%) Gaps:27/302 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LDNFQRAEKIGEGTYGIVYKARSNSTGQDVALKKIRLEGETEG-VPSTAIREISLLKNLKHPNVV 68
            ::.:::..|||||:||:|:|.|:.|:||.||:||. :|.|.:. |...|:|||.:||.|||||:|
  Rat     1 MEKYEKLAKIGEGSYGVVFKCRNKSSGQVVAIKKF-VESEDDPVVRKIALREIRMLKQLKHPNLV 64

  Fly    69 QLFDVVISGNNLYMIFEYLNMDLKKLMDKKKDVFTPQLIKSYMHQILDAVGFCHTNRILHRDLKP 133
            .|.:|......::::|||.:..|...:::..:..:..:|||.:.|.|.|:.|||.:..:|||:||
  Rat    65 NLIEVFRRKRKMHLVFEYCDHTLLNELERNPNGVSDGVIKSVLWQTLQALNFCHKHNCIHRDVKP 129

  Fly   134 QNLLVDTAGKIKLADFGLARAFNVPMRAYTHEVVTLWYRAPEILLGTKFYSTGVDIWSLGCIFSE 198
            :|:|:...|.||:.|||.||.. :|..|||..|.|.||||||:|:|...|.:.||||::||:|:|
  Rat   130 ENILIAKQGVIKICDFGFARIL-IPGDAYTDYVATRWYRAPELLVGDTKYGSSVDIWAVGCVFAE 193

  Fly   199 MIMRRSLFPGDSEIDQLYRIFRTLSTPDETNWPGVTQLPDFKTKFPR---WEGTNMPQP---ITE 257
            ::..:.|:||.|::||||.|.|||.          ..:|..::.|..   :.|.::|:|   .|.
  Rat   194 LLTGQPLWPGKSDVDQLYLIIRTLG----------KLIPRHQSIFKSNQFFRGISIPEPEDMETL 248

  Fly   258 HEAHELIMSM--------LCYDPNLRISAKDALQHAYFRNVQ 291
            .|....:..|        |..||:.|::....|...||.:.|
  Rat   249 EEKFSNVQPMALSFMKGCLKMDPDERLTCAQLLDSTYFESFQ 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk2NP_524420.1 STKc_CDK1_CdkB_like 8..287 CDD:270829 110/293 (38%)
Cdkl4NP_001419046.1 STKc_CDKL1_4 2..286 CDD:270837 110/295 (37%)

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