DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk2 and cdk9

DIOPT Version :10

Sequence 1:NP_524420.1 Gene:Cdk2 / 42453 FlyBaseID:FBgn0004107 Length:314 Species:Drosophila melanogaster
Sequence 2:XP_012823646.1 Gene:cdk9 / 448039 XenbaseID:XB-GENE-483721 Length:382 Species:Xenopus tropicalis


Alignment Length:310 Identity:115/310 - (37%)
Similarity:174/310 - (56%) Gaps:27/310 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LDNFQRAEKIGEGTYGIVYKARSNSTGQDVALKKIRLEGETEGVPSTAIREISLLKNLKHPNVVQ 69
            :..::|..|||:||:|.|:||:...||:.|||||:.:|.|.||.|.||:|||.:|:.|||.|||.
 Frog    16 VSKYERLAKIGQGTFGEVFKAKHRQTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVN 80

  Fly    70 LFDVVISGNNL------------------YMIFEYLNMDLKKLMDKKKDVFTPQLIKSYMHQILD 116
            |.::..:.|:|                  :::|::...||..|:......||...||..|..:|:
 Frog    81 LIEICRTKNSLAHLVSPTANQYNRCKGTIFLVFDFCEHDLAGLLSNAHVKFTLSEIKKVMQMLLN 145

  Fly   117 AVGFCHTNRILHRDLKPQNLLVDTAGKIKLADFGLARAFNVPMRA----YTHEVVTLWYRAPEIL 177
            .:.:.|.|:|||||:|..|:|:...|.:|||||||||||::...:    ||:.|||||||.||:|
 Frog   146 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNKYTNRVVTLWYRPPELL 210

  Fly   178 LGTKFYSTGVDIWSLGCIFSEMIMRRSLFPGDSEIDQLYRIFRTLSTPDETNWPGVTQLPDF-KT 241
            ||.:.|...:|:|..|||.:||..|..:..|::|..||..|.:...:.....||.|.:...: |.
 Frog   211 LGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPNVDKYELYQKL 275

  Fly   242 KFPRWEGTNMPQPITEH----EAHELIMSMLCYDPNLRISAKDALQHAYF 287
            :.|:.:...:.:.:..:    .|.:||..:|..||..||.:.|||.|.:|
 Frog   276 ELPKGQKRKVKERLKAYVKDLYALDLIDKLLVLDPAQRIDSDDALNHDFF 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk2NP_524420.1 STKc_CDK1_CdkB_like 8..287 CDD:270829 114/305 (37%)
cdk9XP_012823646.1 STKc_CDK9 6..325 CDD:270848 114/308 (37%)

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