DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cdk2 and p38a

DIOPT Version :10

Sequence 1:NP_524420.1 Gene:Cdk2 / 42453 FlyBaseID:FBgn0004107 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_477163.1 Gene:p38a / 42866 FlyBaseID:FBgn0015765 Length:366 Species:Drosophila melanogaster


Alignment Length:334 Identity:109/334 - (32%)
Similarity:163/334 - (48%) Gaps:51/334 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ILDNFQRAEKIGEGTYGIVYKARSNSTGQDVALKKIRLEGETEGVPSTAIREISLLKNLKHPNVV 68
            |.|.:|..:.:|.|.||.|.||....|...||:||:....::........||:.|||::.|.||:
  Fly    21 IPDIYQDLQPVGSGAYGQVSKAVVRGTNMHVAIKKLARPFQSAVHAKRTYRELRLLKHMDHENVI 85

  Fly    69 QLFDVV----ISGN-----NLYMIFEYLNMDLKKLMDKKKDVFTPQLIKSYMHQILDAVGFCHTN 124
            .|.|:.    .:|:     .:|::...::.||..::  :....:...::..::|||..:.:.|:.
  Fly    86 GLLDIFHPHPANGSLENFQQVYLVTHLMDADLNNII--RMQHLSDDHVQFLVYQILRGLKYIHSA 148

  Fly   125 RILHRDLKPQNLLVDTAGKIKLADFGLARAFNVPMRAYTHEVVTLWYRAPEILLGTKFYSTGVDI 189
            .::||||||.|:.|:...::::.||||||.....|..|   |.|.|||||||:|....|...|||
  Fly   149 GVIHRDLKPSNIAVNEDCELRILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYDQTVDI 210

  Fly   190 WSLGCIFSEMIMRRSLFPGDSEIDQLYRIFRTLSTP---------DETNWPGVTQLP-----DFK 240
            ||:|||.:|:|.||:||||...|.||..|...|.||         .|:....:..||     .||
  Fly   211 WSVGCIMAELITRRTLFPGTDHIHQLNLIMEMLGTPPAEFLKKISSESARSYIQSLPPMKGRSFK 275

  Fly   241 TKFPRWEGTNMPQPITEHEAHELIMSMLCYDPNLRISAKDALQHAYFR-----NVQHV----DH- 295
            ..|..      ..|:    |.:|:..||..|...||:|::||.|.|..     :|:..    || 
  Fly   276 NVFKN------ANPL----AIDLLEKMLELDAEKRITAEEALSHPYLEKYAEPSVEQTSPPYDHS 330

  Fly   296 ---VALPVD 301
               :.||||
  Fly   331 FEDMDLPVD 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk2NP_524420.1 STKc_CDK1_CdkB_like 8..287 CDD:270829 99/301 (33%)
p38aNP_477163.1 STKc_p38 9..354 CDD:143356 109/334 (33%)

Return to query results.
Submit another query.