DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk2 and cdk8

DIOPT Version :10

Sequence 1:NP_524420.1 Gene:Cdk2 / 42453 FlyBaseID:FBgn0004107 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_989246.1 Gene:cdk8 / 394856 XenbaseID:XB-GENE-962267 Length:464 Species:Xenopus tropicalis


Alignment Length:318 Identity:118/318 - (37%)
Similarity:172/318 - (54%) Gaps:51/318 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KIGEGTYGIVYKA--RSNSTGQDVALKKIRLEGETEGVPSTAIREISLLKNLKHPNVVQLFDVVI 75
            |:|.||||.||||  :.....:|.|||:|    |..|:..:|.|||:||:.||||||:.|..|.:
 Frog    26 KVGRGTYGHVYKAKRKDGRDDRDYALKQI----EGTGISMSACREIALLRELKHPNVISLQKVFL 86

  Fly    76 S--GNNLYMIFEYLNMDLKKLMD-------KKKDVFTPQ-LIKSYMHQILDAVGFCHTNRILHRD 130
            |  ...::::|::...||..::.       .||.|..|: ::||.::||||.:.:.|.|.:||||
 Frog    87 SHADRKVWLLFDFAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRD 151

  Fly   131 LKPQNLLV----DTAGKIKLADFGLARAFNVPMRAYTH---EVVTLWYRAPEILLGTKFYSTGVD 188
            |||.|:||    ...|::|:||.|.||.||.|::....   .|||.||||||:|||.:.|:..:|
 Frog   152 LKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAID 216

  Fly   189 IWSLGCIFSEMIMRRSLFPGDSE---------IDQLYRIFRTLSTPDETNWPGVTQLPDFKT--- 241
            ||::||||:|::....:|....|         .|||.|||..:..|.:.:|..:.::|:..|   
 Frog   217 IWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLIK 281

  Fly   242 KFPRWEGTN------------MPQPITEHEAHELIMSMLCYDPNLRISAKDALQHAYF 287
            .|.|...||            .|...|.|    |:..:|..||..|||::.|:|..||
 Frog   282 DFRRNTYTNCSLIKYMEKHKVKPDSKTFH----LLQKLLTMDPIKRISSEQAMQDPYF 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk2NP_524420.1 STKc_CDK1_CdkB_like 8..287 CDD:270829 116/316 (37%)
cdk8NP_989246.1 Interaction with CCNC. /evidence=ECO:0000250 1..15
Protein Kinases, catalytic domain 3..335 CDD:473864 116/316 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 361..464
Blue background indicates that the domain is not in the aligned region.

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