DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk2 and Cdk8

DIOPT Version :10

Sequence 1:NP_524420.1 Gene:Cdk2 / 42453 FlyBaseID:FBgn0004107 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_536735.2 Gene:Cdk8 / 39157 FlyBaseID:FBgn0015618 Length:454 Species:Drosophila melanogaster


Alignment Length:315 Identity:114/315 - (36%)
Similarity:180/315 - (57%) Gaps:43/315 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KIGEGTYGIVYKA--RSNSTGQDVALKKIRLEGETEGVPSTAIREISLLKNLKHPNVVQLFDVVI 75
            |:|.||||.||||  :..|.|::.|||:|    :..|:..:|.|||:||:.|||.||:.|..|.:
  Fly    26 KVGRGTYGHVYKAKWKETSDGKEYALKQI----DGTGLSMSACREIALLRELKHQNVITLIRVFL 86

  Fly    76 SGNN--LYMIFEYLNMDLKKLMD-------KKKDVFTPQ-LIKSYMHQILDAVGFCHTNRILHRD 130
            |.|:  ::::.:|...||..::.       .||.|..|: ::||.::||||.:.:.|:|.:||||
  Fly    87 SHNDRKVFLLIDYAEHDLWHIIKFHRAAKATKKQVVVPRGMVKSLLYQILDGIHYLHSNWVLHRD 151

  Fly   131 LKPQNLLV----DTAGKIKLADFGLARAFNVPMRAYTH---EVVTLWYRAPEILLGTKFYSTGVD 188
            |||.|:||    :..|::|:||.|.||.||.|::....   .|||.||||||:|||.:.|:..:|
  Fly   152 LKPANILVMGDGNERGRVKIADMGFARLFNAPLKPLADLDPVVVTFWYRAPELLLGARHYTKAID 216

  Fly   189 IWSLGCIFSEMIMRRSLFPGDSE---------IDQLYRIFRTLSTPDETNWPGVTQLPDFKT--- 241
            ||::||||:|::....:|....|         .|||.|||..:..|.:.:|..:.::|:..|   
  Fly   217 IWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPQDKDWEDIKKMPEHHTLTK 281

  Fly   242 --KFPRWEGTNMPQPITEH------EAHELIMSMLCYDPNLRISAKDALQHAYFR 288
              |...:...::.:.:..|      :|..|:..:|..|||.||:::.|:|..||:
  Fly   282 DFKRSTYSTCSLAKYMERHKIKPDSKAFHLLQKLLLMDPNKRITSEQAMQDQYFQ 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk2NP_524420.1 STKc_CDK1_CdkB_like 8..287 CDD:270829 112/312 (36%)
Cdk8NP_536735.2 STKc_CDK8_like 19..335 CDD:270834 112/312 (36%)

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