DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk2 and mcs6

DIOPT Version :10

Sequence 1:NP_524420.1 Gene:Cdk2 / 42453 FlyBaseID:FBgn0004107 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_596349.1 Gene:mcs6 / 2540471 PomBaseID:SPBC19F8.07 Length:335 Species:Schizosaccharomyces pombe


Alignment Length:300 Identity:122/300 - (40%)
Similarity:183/300 - (61%) Gaps:16/300 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FQRAEKIGEGTYGIVYKARSNSTGQDVALKKIRLEGETEGVPSTAIREISLLKNLKHPNVVQLFD 72
            :.:..|:|||||.:|:..|...|.:.||:|||::....:|:..:|:|||..|:..:|.||::|.|
pombe    11 YVKERKVGEGTYAVVFLGRQKETNRRVAIKKIKVGQFKDGIDISALREIKFLRESRHDNVIELVD 75

  Fly    73 VVISGNNLYMIFEYLNMDLKKLMDKKKDVFTPQLIKSYMHQILDAVGFCHTNRILHRDLKPQNLL 137
            |..:.:||.:|.|:|:.||:.|:..|..||.|..|||:|..:|..:...|:..||||||||.|||
pombe    76 VFSTKSNLNIILEFLDSDLEMLIKDKFIVFQPAHIKSWMVMLLRGLHHIHSRFILHRDLKPNNLL 140

  Fly   138 VDTAGKIKLADFGLARAFNVPMRAYTHEVVTLWYRAPEILLGTKFYSTGVDIWSLGCIFSEMIMR 202
            :.:.|.:|||||||:|.|..|.. .:|:|:|.|||.||:.:|.:.|.||||:||:||||:|:::|
pombe   141 ISSDGVLKLADFGLSRDFGTPSH-MSHQVITRWYRPPELFMGCRSYGTGVDMWSVGCIFAELMLR 204

  Fly   203 RSLFPGDSEIDQLYRIFRTLSTPDETNWPGVTQLPDFKTKFPRWEGTNMPQP---------ITEH 258
            ....||:|::|||..|||.|.||:......:.|||::.      |..::|.|         ...|
pombe   205 TPYLPGESDLDQLNVIFRALGTPEPEVIKSMQQLPNYV------EMKHIPPPNGGMEALFSAAGH 263

  Fly   259 EAHELIMSMLCYDPNLRISAKDALQHAYFRNVQHVDHVAL 298
            |..:|:..||.|:|..|.:|:.||:|.||..:....|.:|
pombe   264 EEIDLLKMMLDYNPYRRPTAQQALEHHYFSALPKPTHPSL 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk2NP_524420.1 STKc_CDK1_CdkB_like 8..287 CDD:270829 118/287 (41%)
mcs6NP_596349.1 STKc_CDK7 11..305 CDD:270833 121/299 (40%)

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