DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk2 and cdc2

DIOPT Version :9

Sequence 1:NP_001163666.1 Gene:Cdk2 / 42453 FlyBaseID:FBgn0004107 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_001342995.1 Gene:cdc2 / 2539869 PomBaseID:SPBC11B10.09 Length:297 Species:Schizosaccharomyces pombe


Alignment Length:295 Identity:171/295 - (57%)
Similarity:228/295 - (77%) Gaps:10/295 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LDNFQRAEKIGEGTYGIVYKARSNSTGQDVALKKIRLEGETEGVPSTAIREISLLKNL----KHP 65
            ::|:|:.|||||||||:|||||...:|:.||:||||||.|:|||||||||||||||.:    ...
pombe     1 MENYQKVEKIGEGTYGVVYKARHKLSGRIVAMKKIRLEDESEGVPSTAIREISLLKEVNDENNRS 65

  Fly    66 NVVQLFDVVISGNNLYMIFEYLNMDLKKLMDKKKDV----FTPQLIKSYMHQILDAVGFCHTNRI 126
            |.|:|.|::.:.:.||::||:|:|||||.||:..:.    ..|:|::.:.:|:::.|.|||:.||
pombe    66 NCVRLLDILHAESKLYLVFEFLDMDLKKYMDRISETGATSLDPRLVQKFTYQLVNGVNFCHSRRI 130

  Fly   127 LHRDLKPQNLLVDTAGKIKLADFGLARAFNVPMRAYTHEVVTLWYRAPEILLGTKFYSTGVDIWS 191
            :||||||||||:|..|.:|||||||||:|.||:|.||||:|||||||||:|||::.|||||||||
pombe   131 IHRDLKPQNLLIDKEGNLKLADFGLARSFGVPLRNYTHEIVTLWYRAPEVLLGSRHYSTGVDIWS 195

  Fly   192 LGCIFSEMIMRRSLFPGDSEIDQLYRIFRTLSTPDETNWPGVTQLPDFKTKFPRWEGTNMPQ--P 254
            :||||:|||.|..|||||||||::::||:.|.||:|..|||||.|.|:|:.||||:..::.:  |
pombe   196 VGCIFAEMIRRSPLFPGDSEIDEIFKIFQVLGTPNEEVWPGVTLLQDYKSTFPRWKRMDLHKVVP 260

  Fly   255 ITEHEAHELIMSMLCYDPNLRISAKDALQHAYFRN 289
            ..|.:|.||:.:||.|||..|||||.|||..|.|:
pombe   261 NGEEDAIELLSAMLVYDPAHRISAKRALQQNYLRD 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk2NP_001163666.1 PLN00009 5..293 CDD:177649 171/295 (58%)
STKc_CDK1_CdkB_like 8..287 CDD:270829 168/288 (58%)
cdc2NP_001342995.1 STKc_CDK1_CdkB_like 4..293 CDD:270829 168/288 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0594
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H74409
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000411
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100334
Panther 1 1.100 - - LDO PTHR24056
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R185
SonicParanoid 1 1.000 - - X960
TreeFam 1 0.960 - -
98.800

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