DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk2 and pef1

DIOPT Version :10

Sequence 1:NP_524420.1 Gene:Cdk2 / 42453 FlyBaseID:FBgn0004107 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_587921.1 Gene:pef1 / 2539366 PomBaseID:SPCC16C4.11 Length:288 Species:Schizosaccharomyces pombe


Alignment Length:285 Identity:144/285 - (50%)
Similarity:203/285 - (71%) Gaps:5/285 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 NFQRAEKIGEGTYGIVYKARSNSTGQDVALKKIRLEGETEGVPSTAIREISLLKNLKHPNVVQLF 71
            |:||.||:|||||..|||.::..||:.||||.||::.: ||.||||||||||:|.|:|||::.|.
pombe     2 NYQRLEKLGEGTYAHVYKGQNRVTGEIVALKVIRIDAD-EGTPSTAIREISLMKELRHPNIMSLS 65

  Fly    72 DVVISGNNLYMIFEYLNMDLKKLMDK--KKDVFTPQLIKSYMHQILDAVGFCHTNRILHRDLKPQ 134
            ||:.:.|.|.::|||:..||||.||.  .:....|..:|::..|:|..:.|||.||:||||||||
pombe    66 DVLQTENKLMLVFEYMEKDLKKYMDTYGNQGALPPSQVKNFTQQLLKGISFCHENRVLHRDLKPQ 130

  Fly   135 NLLVDTAGKIKLADFGLARAFNVPMRAYTHEVVTLWYRAPEILLGTKFYSTGVDIWSLGCIFSEM 199
            |||:::.|::|||||||||:..:|:..:::||||||||||::|||::.|||.:||||:|||.:||
pombe   131 NLLINSRGELKLADFGLARSIGIPVNTFSNEVVTLWYRAPDVLLGSRVYSTSIDIWSVGCIMAEM 195

  Fly   200 IMRRSLFPGDSEIDQLYRIFRTLSTPDETNWPGVTQLPDFKTKFPRWEGTNMPQ--PITEHEAHE 262
            ...|.||.|.:..|||.:|||.|.||.|.:|||::.||::|..||.::..::..  |..:....:
pombe   196 ATGRPLFAGSNNEDQLLKIFRLLGTPTEQSWPGISLLPEYKPTFPIYKAQDLAYLFPTFDPLGLD 260

  Fly   263 LIMSMLCYDPNLRISAKDALQHAYF 287
            |:..||...|.||.:.:||||||:|
pombe   261 LLRRMLRLQPELRTTGQDALQHAWF 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk2NP_524420.1 STKc_CDK1_CdkB_like 8..287 CDD:270829 142/282 (50%)
pef1NP_587921.1 Protein Kinases, catalytic domain 2..285 CDD:473864 143/283 (51%)

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