DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk2 and cdk-5

DIOPT Version :10

Sequence 1:NP_524420.1 Gene:Cdk2 / 42453 FlyBaseID:FBgn0004107 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_499783.1 Gene:cdk-5 / 176774 WormBaseID:WBGene00000407 Length:292 Species:Caenorhabditis elegans


Alignment Length:291 Identity:148/291 - (50%)
Similarity:199/291 - (68%) Gaps:5/291 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 NFQRAEKIGEGTYGIVYKARSNSTGQDVALKKIRLEGETEGVPSTAIREISLLKNLKHPNVVQLF 71
            |:.:.|||||||||.|:|||:.::|:.||||::||:.:.|||||:|:|||.:|:.|||.|||:|:
 Worm     3 NYDKMEKIGEGTYGTVFKARNKNSGEIVALKRVRLDDDDEGVPSSALREICILRELKHRNVVRLY 67

  Fly    72 DVVISGNNLYMIFEYLNMDLKKLMDKKKDVFTPQLIKSYMHQILDAVGFCHTNRILHRDLKPQNL 136
            |||.|.|.|.::|||.:.||||..|........|..:|.|.|:|..:.|||.:.:||||||||||
 Worm    68 DVVHSENKLTLVFEYCDQDLKKFFDSLNGYMDAQTARSLMLQLLRGLSFCHAHHVLHRDLKPQNL 132

  Fly   137 LVDTAGKIKLADFGLARAFNVPMRAYTHEVVTLWYRAPEILLGTKFYSTGVDIWSLGCIFSEMI- 200
            |::|.|.:|||||||||||.||:|.::.||||||||.|::|.|.|.|:|.:|:||.||||:|:. 
 Worm   133 LINTNGTLKLADFGLARAFGVPVRCFSAEVVTLWYRPPDVLFGAKLYNTSIDMWSAGCIFAEISN 197

  Fly   201 MRRSLFPGDSEIDQLYRIFRTLSTPDETNWPGVTQLPDFKTKFPRWEGT---NMPQPITEHEAHE 262
            ..|.||||....|||.|||:.|.:|.|.|||.:|||||:| .:|.:..|   :...|.......:
 Worm   198 AGRPLFPGADVDDQLKRIFKQLGSPSEDNWPSITQLPDYK-PYPIYHPTLTWSQIVPNLNSRGRD 261

  Fly   263 LIMSMLCYDPNLRISAKDALQHAYFRNVQHV 293
            |:..:|..:|..||.|..||:||||.:...|
 Worm   262 LLQKLLVCNPAGRIDADAALRHAYFADTSDV 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk2NP_524420.1 STKc_CDK1_CdkB_like 8..287 CDD:270829 144/282 (51%)
cdk-5NP_499783.1 STKc_CDK5 3..286 CDD:143344 145/283 (51%)

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