DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk2 and cdk-1

DIOPT Version :9

Sequence 1:NP_001163666.1 Gene:Cdk2 / 42453 FlyBaseID:FBgn0004107 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_001022747.1 Gene:cdk-1 / 176374 WormBaseID:WBGene00000405 Length:332 Species:Caenorhabditis elegans


Alignment Length:306 Identity:173/306 - (56%)
Similarity:218/306 - (71%) Gaps:14/306 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LDNFQRAEKIGEGTYGIVYKARSNSTGQDVALKKIRLEGETEGVPSTAIREISLLKNLKHPNVVQ 69
            |::|.:.|||||||||:|||.::..|...||:||||||.|.|||||||:|||||||.|:|||||.
 Worm    19 LNDFTKLEKIGEGTYGVVYKGKNRRTNAMVAMKKIRLESEDEGVPSTAVREISLLKELQHPNVVG 83

  Fly    70 LFDVVISGNNLYMIFEYLNMDLKKLMDK-KKDVFTP-QLIKSYMHQILDAVGFCHTNRILHRDLK 132
            |..|::..|.|::|||:|:.|||:.||: .||.:.| :.:|||..|||.|:.|||..|::|||||
 Worm    84 LEAVIMQENRLFLIFEFLSFDLKRYMDQLGKDEYLPLETLKSYTFQILQAMCFCHQRRVIHRDLK 148

  Fly   133 PQNLLVDTAGKIKLADFGLARAFNVPMRAYTHEVVTLWYRAPEILLGTKFYSTGVDIWSLGCIFS 197
            |||||||..|.|||||||||||..:|:|.||||||||||||||||:|.:.||.|||:||:||||:
 Worm   149 PQNLLVDNNGAIKLADFGLARAIGIPIRVYTHEVVTLWYRAPEILMGAQRYSMGVDMWSIGCIFA 213

  Fly   198 EMIMRRSLFPGDSEIDQLYRIFRTLSTPDETNWPGVTQLPDFKTKFPRWE---------GTNMPQ 253
            ||..::.||.||||||:|:||||.|.||.|..|.||..|||:|..||:|.         .....:
 Worm   214 EMATKKPLFQGDSEIDELFRIFRVLGTPTELEWNGVESLPDYKATFPKWRENFLRDKFYDKKTGK 278

  Fly   254 PITEHEAHELIMSMLCYDPNLRISAKDALQHAYFRNVQHVDHVALP 299
            .:.:..|..|:..:|.|||:||::||.||.|.||.|   :|...||
 Worm   279 HLLDDTAFSLLEGLLIYDPSLRLNAKKALVHPYFDN---MDTSKLP 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk2NP_001163666.1 PLN00009 5..293 CDD:177649 170/298 (57%)
STKc_CDK1_CdkB_like 8..287 CDD:270829 166/289 (57%)
cdk-1NP_001022747.1 PLN00009 19..315 CDD:177649 170/298 (57%)
STKc_CDK1_euk 21..312 CDD:270845 166/290 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0594
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1010560at2759
OrthoFinder 1 1.000 - - FOG0000411
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100334
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R185
SonicParanoid 1 1.000 - - X960
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.750

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