DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk2 and cdk-2

DIOPT Version :9

Sequence 1:NP_001163666.1 Gene:Cdk2 / 42453 FlyBaseID:FBgn0004107 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_001021537.2 Gene:cdk-2 / 171911 WormBaseID:WBGene00019362 Length:338 Species:Caenorhabditis elegans


Alignment Length:307 Identity:144/307 - (46%)
Similarity:197/307 - (64%) Gaps:27/307 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTT-------ILDNFQRAEKIGEGTYGIVYKARSNSTGQDVALKKIRLEGETEGVPSTAIREISL 58
            |||       :...|....:|||||||:|:||.........|||.||.:.:.||:|||.:||||.
 Worm     1 MTTDIAPERDLQGRFCSLRRIGEGTYGVVFKAIHVRDNVKCALKMIRTDRDEEGIPSTCLREISC 65

  Fly    59 LKNLKHPNVVQLFDVVISGNNLYMIFEYLNMDLKKL---MDKKKDVFTPQLIKSYMHQILDAVGF 120
            :|:|:|.|:|.|||::.:.:.|||:||:::.|||.|   ::....|..|..:||:|.|:|.|:.:
 Worm    66 IKDLQHDNIVTLFDIIYANSKLYMVFEFIDRDLKNLLEMLEPTNSVLPPNYVKSFMWQLLSALSY 130

  Fly   121 CHTNRILHRDLKPQNLLVDTAGKIKLADFGLARAFNVPMRAYTHEVVTLWYRAPEILLGTKFYST 185
            ||..||:||||||||:||..:|.||:|||||||.|:.|.|.|||||||||||.||||||::.|||
 Worm   131 CHLRRIVHRDLKPQNILVSDSGVIKIADFGLARNFSFPSRNYTHEVVTLWYRPPEILLGSQRYST 195

  Fly   186 GVDIWSLGCIFSEMIMRRSLFPGDSEIDQLYRIFRTLSTPDETNWPGVTQLPDFKTKFPRWEGTN 250
            .:|:|||||||||:...:.||||:.||.||::||..:.||:..:||||...|.:|..||:|    
 Worm   196 SLDMWSLGCIFSEIASNKPLFPGECEISQLFKIFEIVGTPNIKSWPGVDSFPHYKAVFPQW---- 256

  Fly   251 MPQPITEHEAHE----------LIMSMLCYDPNLRISAKDALQHAYF 287
               |:...:..|          ::..:|.|.|..|::||.||.|.||
 Worm   257 ---PVNLKKLEETSCLTGNGLDVLREILRYPPERRLTAKGALSHRYF 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk2NP_001163666.1 PLN00009 5..293 CDD:177649 141/296 (48%)
STKc_CDK1_CdkB_like 8..287 CDD:270829 139/291 (48%)
cdk-2NP_001021537.2 STKc_CDK_like 15..300 CDD:270823 139/291 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0594
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1010560at2759
OrthoFinder 1 1.000 - - FOG0000411
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR24056
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.880

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