DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk2 and Cdk7

DIOPT Version :10

Sequence 1:NP_524420.1 Gene:Cdk2 / 42453 FlyBaseID:FBgn0004107 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_001385585.1 Gene:Cdk7 / 171150 RGDID:621124 Length:346 Species:Rattus norvegicus


Alignment Length:292 Identity:129/292 - (44%)
Similarity:185/292 - (63%) Gaps:16/292 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FQRAEKIGEGTYGIVYKARSNSTGQDVALKKIRLEGETE---GVPSTAIREISLLKNLKHPNVVQ 69
            :::.:.:|||.:..|||||..:|.|.||:|||:|...:|   |:..||:|||.||:.|.|||::.
  Rat    12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG 76

  Fly    70 LFDVVISGNNLYMIFEYLNMDLKKLMDKKKDVFTPQLIKSYMHQILDAVGFCHTNRILHRDLKPQ 134
            |.|.....:|:.::|:::..||:.::.....|.||..||:||...|..:.:.|.:.||||||||.
  Rat    77 LLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPN 141

  Fly   135 NLLVDTAGKIKLADFGLARAFNVPMRAYTHEVVTLWYRAPEILLGTKFYSTGVDIWSLGCIFSEM 199
            |||:|..|.:||||||||::|..|.|||||:|||.||||||:|.|.:.|..|||:|::|||.:|:
  Rat   142 NLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAEL 206

  Fly   200 IMRRSLFPGDSEIDQLYRIFRTLSTPDETNWPGVTQLPDFKTKFPRWEGTNMPQPITEH------ 258
            ::|....||||::|||.|||.||.||.|..||.:..|||:.| |..:.|..:     :|      
  Rat   207 LLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVT-FKSFPGIPL-----QHIFIAAG 265

  Fly   259 -EAHELIMSMLCYDPNLRISAKDALQHAYFRN 289
             :..|||..:..::|..||:|..||:..||.|
  Rat   266 DDLLELIQGLFLFNPCTRITASQALRTKYFSN 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk2NP_524420.1 STKc_CDK1_CdkB_like 8..287 CDD:270829 126/288 (44%)
Cdk7NP_001385585.1 STKc_CDK7 11..308 CDD:270833 129/292 (44%)

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