DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk2 and Cdk6

DIOPT Version :10

Sequence 1:NP_524420.1 Gene:Cdk2 / 42453 FlyBaseID:FBgn0004107 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_001178790.1 Gene:Cdk6 / 114483 RGDID:621121 Length:326 Species:Rattus norvegicus


Alignment Length:311 Identity:132/311 - (42%)
Similarity:197/311 - (63%) Gaps:35/311 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DNFQRAE-------KIGEGTYGIVYKARS-NSTGQDVALKKIRLEGETEGVPSTAIREISLLKNL 62
            |:..||:       :||||.||.|:|||. .:.|:.||||::|::...||:|.:.|||:::|::|
  Rat     4 DSLSRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68

  Fly    63 ---KHPNVVQLFDV-VISGNN----LYMIFEYLNMDLKKLMDKKKDVFTP-QLIKSYMHQILDAV 118
               :|||||:|||| .:|..:    |.::||:::.||...:||..:...| :.||..|.|:|..:
  Rat    69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 133

  Fly   119 GFCHTNRILHRDLKPQNLLVDTAGKIKLADFGLARAFNVPMRAYTHEVVTLWYRAPEILLGTKFY 183
            .|.|::|::||||||||:||.::|:||||||||||.::..| |.|..||||||||||:||.:. |
  Rat   134 DFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM-ALTSVVVTLWYRAPEVLLQSS-Y 196

  Fly   184 STGVDIWSLGCIFSEMIMRRSLFPGDSEIDQLYRIFRTLSTPDETNWPGVTQLP--DFKTKFPRW 246
            :|.||:||:||||:|:..|:.||.|.|::|||.:|...:..|.|.:||....||  .|.:|    
  Rat   197 ATPVDLWSVGCIFAELFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSK---- 257

  Fly   247 EGTNMPQPI------TEHEAHELIMSMLCYDPNLRISAKDALQHAYFRNVQ 291
                ..|||      .:....:|::..|.::|..||||..||.|.||::::
  Rat   258 ----SAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYGALNHPYFQDLE 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk2NP_524420.1 STKc_CDK1_CdkB_like 8..287 CDD:270829 129/303 (43%)
Cdk6NP_001178790.1 STKc_CDK6 11..300 CDD:270846 127/298 (43%)

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