DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk2 and CDK4

DIOPT Version :9

Sequence 1:NP_001163666.1 Gene:Cdk2 / 42453 FlyBaseID:FBgn0004107 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_000066.1 Gene:CDK4 / 1019 HGNCID:1773 Length:303 Species:Homo sapiens


Alignment Length:301 Identity:131/301 - (43%)
Similarity:185/301 - (61%) Gaps:22/301 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FQRAEKIGEGTYGIVYKARSNSTGQDVALKKIRLE---GETEGVPSTAIREISLLKNL---KHPN 66
            ::...:||.|.||.|||||...:|..||||.:|:.   |...|:|.:.:||::||:.|   :|||
Human     6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPN 70

  Fly    67 VVQLFDVVISGN-----NLYMIFEYLNMDLKKLMDKKKDVFTP-QLIKSYMHQILDAVGFCHTNR 125
            ||:|.||..:..     .:.::||:::.||:..:||......| :.||..|.|.|..:.|.|.|.
Human    71 VVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC 135

  Fly   126 ILHRDLKPQNLLVDTAGKIKLADFGLARAFNVPMRAYTHEVVTLWYRAPEILLGTKFYSTGVDIW 190
            |:||||||:|:||.:.|.:|||||||||.::..| |.|..||||||||||:||.:. |:|.||:|
Human   136 IVHRDLKPENILVTSGGTVKLADFGLARIYSYQM-ALTPVVVTLWYRAPEVLLQST-YATPVDMW 198

  Fly   191 SLGCIFSEMIMRRSLFPGDSEIDQLYRIFRTLSTPDETNWPGVTQLP--DFKTKFPRWEGTNMPQ 253
            |:||||:||..|:.||.|:||.|||.:||..:..|.|.:||....||  .|..:.||...:.:|:
Human   199 SVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPE 263

  Fly   254 PITEHEAHELIMSMLCYDPNLRISAKDALQHAYFRNVQHVD 294
              .|....:|::.||.::|:.||||..||||:|.    |.|
Human   264 --MEESGAQLLLEMLTFNPHKRISAFRALQHSYL----HKD 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk2NP_001163666.1 PLN00009 5..293 CDD:177649 129/298 (43%)
STKc_CDK1_CdkB_like 8..287 CDD:270829 128/292 (44%)
CDK4NP_000066.1 PKc_like 5..295 CDD:389743 128/292 (44%)
Required for binding D-type cyclins 50..56 1/5 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0594
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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