DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk2 and cdkl1

DIOPT Version :10

Sequence 1:NP_524420.1 Gene:Cdk2 / 42453 FlyBaseID:FBgn0004107 Length:314 Species:Drosophila melanogaster
Sequence 2:XP_012825009.1 Gene:cdkl1 / 100496578 XenbaseID:XB-GENE-6051219 Length:352 Species:Xenopus tropicalis


Alignment Length:331 Identity:118/331 - (35%)
Similarity:172/331 - (51%) Gaps:49/331 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LDNFQRAEKIGEGTYGIVYKARSNSTGQDVALKKIRLEGETEGV-PSTAIREISLLKNLKHPNVV 68
            ::.:::..|||||:||:|:|.|:..|||.||:||. ||.|.:.| ...|:|||.:||.|||||:|
 Frog     1 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKF-LESEDDPVIKKIALREIRMLKQLKHPNLV 64

  Fly    69 QLFDVVISGNNLYMIFEYLNMDLKKLMDKKKDVFTPQLIKSYMHQILDAVGFCHTNRILHRDLKP 133
            .|.:|......|:::|||.:..:...:||........|:||...|.|.||.|||.:..:|||:||
 Frog    65 NLLEVFRRKRKLHLVFEYCDHTVLHELDKYPRGVPEHLVKSITWQTLQAVNFCHKHHCIHRDVKP 129

  Fly   134 QNLLVDTAGKIKLADFGLARAFNVPMRAYTHEVVTLWYRAPEILLGTKFYSTGVDIWSLGCIFSE 198
            :|:|:.....|||.|||.||....|...||..|.|.||||||:|:|...|...||:|::||:|:|
 Frog   130 ENILITRHSVIKLCDFGFARLLTGPSDYYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAE 194

  Fly   199 MIMRRSLFPGDSEIDQLYRI--------------------FRTLSTPDETNWPGVTQLPDFKTKF 243
            ::....|:||.|::||||.|                    |..:|.||..|      :...:.:|
 Frog   195 LLSGIPLWPGKSDVDQLYLIRKSQGDLIARHQQVFSTNQFFSGVSIPDPEN------MEPLELRF 253

  Fly   244 PRWEGTNMPQPITEHEAHELIMSMLCYDPNLRISAKDALQHAYFRNVQHVDHVALPVDPNAG--S 306
            |.          ...:|..|:...|..||..|::.:..|.|.||.:::         |...|  .
 Frog   254 PN----------ISSQALGLMKGCLHMDPAKRLACQQLLDHPYFDSIR---------DEGDGVTD 299

  Fly   307 ASRLTR 312
            :.||:|
 Frog   300 SERLSR 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk2NP_524420.1 STKc_CDK1_CdkB_like 8..287 CDD:270829 111/299 (37%)
cdkl1XP_012825009.1 STKc_CDKL1_4 2..287 CDD:270837 111/301 (37%)

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