DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk2 and cdk13

DIOPT Version :10

Sequence 1:NP_524420.1 Gene:Cdk2 / 42453 FlyBaseID:FBgn0004107 Length:314 Species:Drosophila melanogaster
Sequence 2:XP_002940845.2 Gene:cdk13 / 100489599 XenbaseID:XB-GENE-6040279 Length:1391 Species:Xenopus tropicalis


Alignment Length:305 Identity:123/305 - (40%)
Similarity:178/305 - (58%) Gaps:24/305 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LDNFQRAEKIGEGTYGIVYKARSNSTGQDVALKKIRLEGETEGVPSTAIREISLLKNLKHPNVVQ 69
            :|.|.....|||||||.||||:...||:.|||||:||:.|.||.|.||||||.:|:.|.|.:::.
 Frog   595 VDKFDIIGIIGEGTYGQVYKAKDKDTGEMVALKKVRLDNEKEGFPITAIREIKILRQLNHQSIIN 659

  Fly    70 LFDVVISGNN----------LYMIFEYLNMDLKKLMDKKKDVFTPQLIKSYMHQILDAVGFCHTN 124
            :.::|....:          .|::|||::.||..|::.....|....|||:|.|:::.:.:||..
 Frog   660 MKEIVTDKEDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFNEHHIKSFMRQLMEGLDYCHKR 724

  Fly   125 RILHRDLKPQNLLVDTAGKIKLADFGLARAF-NVPMRAYTHEVVTLWYRAPEILLGTKFYSTGVD 188
            ..||||:|..|:|::..|:||||||||||.: :...|.||::|:|||||.||:|||.:.||..:|
 Frog   725 NFLHRDIKCSNILLNNRGQIKLADFGLARLYSSEESRPYTNKVITLWYRPPELLLGEERYSPAID 789

  Fly   189 IWSLGCIFSEMIMRRSLFPGDSEIDQLYRIFRTLSTPDETNWPGVTQLPDFKTKFP--------R 245
            :||.|||..|:..::.:|..:.|:.||..|.|...:|....||.|.:||.|.|..|        |
 Frog   790 VWSCGCILGELFTKKPIFQANQELAQLELISRMCGSPCPAVWPDVIKLPYFNTMKPKKQYRRKLR 854

  Fly   246 WEGTNMPQPITEHEAHELIMSMLCYDPNLRISAKDALQHAYFRNV 290
            .|...:|     :.|.:|...||..|||.|.:|:.||...:.|:|
 Frog   855 EEFVFIP-----NAALDLFDHMLALDPNKRCTAEQALLCEFLRDV 894

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk2NP_524420.1 STKc_CDK1_CdkB_like 8..287 CDD:270829 120/297 (40%)
cdk13XP_002940845.2 STKc_CDK12 590..891 CDD:270847 121/300 (40%)

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