DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk2 and cdk6

DIOPT Version :9

Sequence 1:NP_001163666.1 Gene:Cdk2 / 42453 FlyBaseID:FBgn0004107 Length:314 Species:Drosophila melanogaster
Sequence 2:XP_005159752.1 Gene:cdk6 / 100034507 ZFINID:ZDB-GENE-060503-786 Length:324 Species:Danio rerio


Alignment Length:300 Identity:135/300 - (45%)
Similarity:197/300 - (65%) Gaps:26/300 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FQRAEKIGEGTYGIVYKARS-NSTGQDVALKKIRLEGETEGVPSTAIREISLLKNL---KHPNVV 68
            ::...:||||.||.|||||. .:.|:.||||::|::.|.||:|.:.|||:::|:.|   :|||||
Zfish    10 YEPVAEIGEGAYGKVYKARDLKNGGRFVALKRVRVQTEEEGMPLSTIREVAVLRQLESFEHPNVV 74

  Fly    69 QLFDV-VISGNN----LYMIFEYLNMDLKKLMDKKKDV-FTPQLIKSYMHQILDAVGFCHTNRIL 127
            :|||| .:|..:    |.::||:::.||...::|..|. ..|:.||..|:|:|..:.|.|::|::
Zfish    75 RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLEKAPDPGVPPETIKDMMYQLLQGLDFLHSHRVV 139

  Fly   128 HRDLKPQNLLVDTAGKIKLADFGLARAFNVPMRAYTHEVVTLWYRAPEILLGTKFYSTGVDIWSL 192
            ||||||||:||.:.|:||||||||||.::..| |.|..||||||||||:||.:. |:|.||:||:
Zfish   140 HRDLKPQNILVTSGGQIKLADFGLARIYSFQM-ALTSVVVTLWYRAPEVLLQSS-YATPVDLWSV 202

  Fly   193 GCIFSEMIMRRSLFPGDSEIDQLYRIFRTLSTPDETNWPGVTQLPDFKTKF-PRWEGTNMPQPI- 255
            ||||:||..||.||.|:|::|||.:||..:..|...:||....||  ::.| ||     ..||| 
Zfish   203 GCIFAEMFRRRPLFRGNSDVDQLGKIFDVVGVPSPEDWPQEVGLP--QSAFSPR-----PAQPIE 260

  Fly   256 -----TEHEAHELIMSMLCYDPNLRISAKDALQHAYFRNV 290
                 .:.....|::..|.::|:.||||.|||.|.||:::
Zfish   261 NLVPDMDELGKSLLLRFLSFNPSRRISAYDALSHLYFQSL 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk2NP_001163666.1 PLN00009 5..293 CDD:177649 135/299 (45%)
STKc_CDK1_CdkB_like 8..287 CDD:270829 133/295 (45%)
cdk6XP_005159752.1 PLN00009 8..303 CDD:177649 135/299 (45%)
STKc_CDK6 8..297 CDD:270846 133/295 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0594
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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