DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oct-TyrR and adora2b

DIOPT Version :10

Sequence 1:NP_524419.2 Gene:Oct-TyrR / 42452 FlyBaseID:FBgn0004514 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001034902.1 Gene:adora2b / 560100 ZFINID:ZDB-GENE-060511-1 Length:351 Species:Danio rerio


Alignment Length:524 Identity:116/524 - (22%)
Similarity:173/524 - (33%) Gaps:240/524 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 EALLTALVLSVIIVLTIIGNILVILSVFTYKPLRIVQNFFIVSLAVADLTVALLVLPFNVAYSIL 172
            ::|..|:.| ||.||:|.||:||..:|.....|:...|:|:|||||||:.|..|.:||.:..|| 
Zfish     2 DSLYIAIEL-VIAVLSIAGNVLVCWAVAINSTLKNATNYFLVSLAVADILVGCLAIPFAITISI- 64

  Fly   173 GRWE--FGIHLCKLWLTCDVLCCT-SSILNLCAIALDRYWAITDPINYAQKRTVGRVLLLISGVW 234
            |.|.  :|   | |:|.|.||..| |||.:|.|:|:|||.|:..|:.|.:..|..|...:|:.:|
Zfish    65 GLWSDFYG---C-LFLACFVLVLTQSSIFSLLAVAIDRYLAVKIPLRYRELVTGKRAREIITILW 125

  Fly   235 LLSLLISSPPLIGWN-----------------DWPDEFTSAT----------PC--ELTSQRGYV 270
            :||.:|...|.:|||                 :..|:..:.|          .|  |......|:
Zfish   126 ILSFIIGLIPFVGWNRKDLACSRNKSGSLQTSNSSDDDAAETETGFLQSCYLECFFEKVVDMSYM 190

  Fly   271 IY-SSLGSFFIPLAIMTIVYIEIFVATRRRLRERARANKLNTIALKSTELEPMANSSPVAASNSG 334
            :| :..|....||.||..:|.:||...|::||:         |.||                   
Zfish   191 VYFNFFGCVLPPLLIMLGIYAKIFTVARKQLRQ---------IELK------------------- 227

  Fly   335 SKSRLLASWLCCGRDRAQFATPMIQNDQESISSETHQPQDSSKAGPHGNSDPQQQHVVVLVKKSR 399
                       |                 |:|                                 
Zfish   228 -----------C-----------------SVS--------------------------------- 231

  Fly   400 RAKTKDSIKHGKTRGGRKSQSSSTCEPHGEQQLLPAGGDGGSCQPGGGHSGGGKSDAEISTESGS 464
                                       :||.|                |.|              
Zfish   232 ---------------------------NGENQ----------------HHG-------------- 239

  Fly   465 DPKGCIQVCVTQADEQTSLKLTPPQSSTGVAAVSVTPLQKKTSGVNQFIEEKQKISLSKERRAAR 529
                                                                   .|.:|.|||:
Zfish   240 -------------------------------------------------------LLQREIRAAK 249

  Fly   530 TLGIIMGVFVICWLPFFLMYVILPFCQTCCPTNKFKNFITWLGYINSGLNPVIYTIFNLDYRRAF 594
            :|.||:|:|.:||||..::..:..|.......:...|....|.:.||.:||:||.....::|..|
Zfish   250 SLSIIVGLFALCWLPVHILNCLTLFYSELKKPSFIMNIAIILSHANSAVNPIIYAYRIREFRVTF 314

  Fly   595 KRLL 598
            :::|
Zfish   315 RKIL 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oct-TyrRNP_524419.2 7tmA_tyramine_octopamine_R-like 110..>294 CDD:320188 75/216 (35%)
TM helix 1 111..137 CDD:320188 12/25 (48%)
TM helix 2 144..170 CDD:320188 13/25 (52%)
TM helix 3 182..212 CDD:320188 17/30 (57%)
TM helix 4 224..247 CDD:320188 7/22 (32%)
TM helix 5 266..294 CDD:320188 9/28 (32%)
7tm_GPCRs <519..594 CDD:475119 24/74 (32%)
TM helix 6 528..550 CDD:410628 10/21 (48%)
TM helix 7 562..587 CDD:410628 8/24 (33%)
adora2bNP_001034902.1 7tm_GPCRs 3..314 CDD:475119 114/517 (22%)
TM helix 1 5..29 CDD:410628 12/24 (50%)
TM helix 2 38..60 CDD:410628 13/21 (62%)
TM helix 3 74..96 CDD:410628 11/21 (52%)
TM helix 4 119..135 CDD:410628 5/15 (33%)
TM helix 5 188..211 CDD:410628 7/22 (32%)
TM helix 6 248..270 CDD:410628 10/21 (48%)
TM helix 7 282..307 CDD:410628 8/24 (33%)

Return to query results.
Submit another query.