DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oct-TyrR and 5-HT2B

DIOPT Version :9

Sequence 1:NP_001163494.1 Gene:Oct-TyrR / 42452 FlyBaseID:FBgn0004514 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001262373.1 Gene:5-HT2B / 41017 FlyBaseID:FBgn0261929 Length:947 Species:Drosophila melanogaster


Alignment Length:901 Identity:185/901 - (20%)
Similarity:296/901 - (32%) Gaps:401/901 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 ADKDSAGECEGAVEEL-------------HASILGLQLAVPEWEALLTALV-------------- 115
            |..||.|:...:.|.|             :|:....||.|..|.|...|.:              
  Fly    11 AYNDSGGDDWSSSEHLVLWEEDETQRTTANATSRHNQLHVARWNATGNATISATFEDVPFDANNY 75

  Fly   116 ---LSVIIVL-TIIGNILVILSVFTYKPLRIVQNFFIVSLAVADLTVALLVLPFNVAYSILGRWE 176
               |::::|| |..|||||.|::...:.|:.|.|:|::|||:.||.||:||:|..:...:.|.:.
  Fly    76 WALLALVLVLGTAAGNILVCLAIAWERRLQNVTNYFLMSLAITDLMVAVLVMPLGILTLVKGYFP 140

  Fly   177 FGIHLCKLWLTCDVLCCTSSILNLCAIALDRYWAITDPINYAQKRTVGRVLLLISGVWLLSLLIS 241
            .|...|..|:..|||.||:||::||.|::|||.::..|:.:.:.:|..||.|.|..|||||:.:|
  Fly   141 LGSEHCLTWICLDVLFCTASIMHLCTISVDRYLSLRYPMRFGRNKTRRRVTLKIVFVWLLSIAMS 205

  Fly   242 SP-PLIGWNDWPDEFTSATPCELTSQRGYVIYSSLGS---FFIPLAIMTIVY-IEIFVATRRR-- 299
            .| .|:...:......:.| |::...    :|..:||   |:|||.:|.:.| :.:.:..|:|  
  Fly   206 LPLSLMYSKNHASVLVNGT-CQIPDP----VYKLVGSIVCFYIPLGVMLLTYCLTVRLLARQRQN 265

  Fly   300 ------------------------LRERARANKLNTIALKSTELEP-MANSSPVAASNSGSKSRL 339
                                    |..|....:|         |:| ..|:|.|..::|.:.:..
  Fly   266 LGGGQQTAAATPGWASGWLGQAPALERRCTWRRL---------LKPGPGNASSVLHAHSANSTDT 321

  Fly   340 LAS-------WLCCGRDRA-------------QFATPMIQNDQ--ESISSE-------------- 368
            ..|       ||   .|.:             ||...|::..:  ||::|.              
  Fly   322 DLSTLDNHELWL---PDSSIKEPTPTTMTALHQFGAEMLKLSRGLESVASSSTTGSPTKSEFSLS 383

  Fly   369 ----------------THQP---------------QDSSKAGPHG-------------------- 382
                            |||.               |.:|..|.||                    
  Fly   384 NHLQLQYPSSPQRYAATHQQSHHHNHQQHPAGVYHQQASPKGRHGTTVLGLSTTTLGIERESTRN 448

  Fly   383 ----------NSD---PQQQHVVVLVKKSRRA--------------------------------- 401
                      .||   .|....:...||.|||                                 
  Fly   449 SLASSRMGGEQSDGTLSQLSQRLRAYKKRRRASSAVPGREKRAGHEDADEDVETPTSTLRRHKRH 513

  Fly   402 -----------------------------------KTKDSIKHGKTR------------GGRKSQ 419
                                               :||..|.|..|.            .|:..|
  Fly   514 NSLPKNALYPRHTTVQESLDDDDDEEEESAQQKDQQTKSKICHSDTELDPPQKAKQCHIAGQNHQ 578

  Fly   420 SS-------STCEPHG----------------------------------EQQLL---------- 433
            |.       .||...|                                  |.:||          
  Fly   579 SDYLQLPSVCTCPYFGDRPLQNCVKSAEVKIISSAFRVTTTTTAVSSSPSEMELLMCSSGNKKSL 643

  Fly   434 -----------PAGGD----GGSCQPGGGHSGGG----KSDAE-ISTESGSDPKGCIQVCVTQAD 478
                       |||..    |.:..|...|:.|.    :||.. .....|:...|..::.:::..
  Fly   644 TSSVSAGITGGPAGAAPATVGSTLSPHSAHNQGSSLTVQSDGSGYLAAPGTPCPGRRKLSISKTA 708

  Fly   479 E-------------------QTSLKLTPPQSSTGVAAVSVTPLQKKTS----------GVNQ--- 511
            .                   :|||.|||.:::|  .:.|.|||::..:          |..:   
  Fly   709 SVVTWDSSRHRRRGSSFGGVRTSLLLTPTKTAT--TSNSSTPLRRSATLRSHQNMNYQGAGECGG 771

  Fly   512 ----------FIEEKQKIS--------------------LSKERRAARTLGIIMGVFVICWLPFF 546
                      .::.:|.:.                    :..|::|.:.||::...|||.|.|||
  Fly   772 KTRTTTSSPCMLQRQQTVRSHHSRNSSVISRNSSRHGRIIRLEQKATKVLGVVFFTFVILWSPFF 836

  Fly   547 LMYVILPFCQTCCPTNKFKNF----ITWLGYINSGLNPVIYTIFNLDYRRAFKRLL 598
            ::.::...|..|  ..:..::    :|||||.:|.:||:.|||||..:|:|||::|
  Fly   837 VLNLLPTVCAEC--EERISHWVFDVVTWLGYASSMVNPIFYTIFNKVFRQAFKKVL 890

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oct-TyrRNP_001163494.1 Zinc_peptidase_like <113..244 CDD:301362 55/149 (37%)
7tm_1 126..>293 CDD:278431 62/171 (36%)
5-HT2BNP_001262373.1 7tm_1 90..>262 CDD:278431 62/176 (35%)
7tm_4 90..>238 CDD:304433 55/152 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460649
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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