DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oct-TyrR and htr5ab

DIOPT Version :10

Sequence 1:NP_524419.2 Gene:Oct-TyrR / 42452 FlyBaseID:FBgn0004514 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001007122.1 Gene:htr5ab / 368475 ZFINID:ZDB-GENE-030616-574 Length:346 Species:Danio rerio


Alignment Length:491 Identity:130/491 - (26%)
Similarity:207/491 - (42%) Gaps:181/491 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 ALLTALVLSVIIVLTIIGNILVILSVFTYKPLRIVQNFFIVSLAVADLTVALLVLPFNVAYSILG 173
            ::||..:|::::|.|.:.|:||::::...:....|.:..:.|:|::|:.||.||:|.::...:.|
Zfish    30 SVLTLTLLAMLVVATFVWNLLVLVTILRVRTFHRVPHNLVASMAISDVMVAGLVMPLSLVRELYG 94

  Fly   174 -RWEFGIHLCKLWLTCDVLCCTSSILNLCAIALDRYWAITDPINYAQKRTVGRVLLLISGV-WLL 236
             ||..|..||::|::|||||||:||.|:.||||||||:||..:.|..| |..|:..::.|: |||
Zfish    95 RRWILGRALCQVWISCDVLCCTASIWNVTAIALDRYWSITRHLEYTLK-TRKRISNVMIGLTWLL 158

  Fly   237 SLLISSPPLIGWNDWPDEFTSATPCELTSQRGYVIYSSLGSFFIPLAIMTIVYIEIFVATRRRLR 301
            |.:||..||.||.:...|.:.|  |:::.:..|.::|:.|:|::||.::..||.:|:.|.:.|:.
Zfish   159 SSVISLSPLFGWGETYSEDSLA--CQVSQEPSYTVFSTFGAFYLPLCVVLFVYWKIYKAAKFRIG 221

  Fly   302 ERARANKLNTIALKSTELEPMANSSPVAASNSGSKSRLLASWLCCGRDRAQFATPMIQNDQESIS 366
            .|    |.|||                                          |||.:       
Zfish   222 SR----KTNTI------------------------------------------TPMAE------- 233

  Fly   367 SETHQPQDSSKAGPHGNSDPQQQHVVVLVKKSRRAKTKDSIKHGKTRGGRKSQSSSTCEPHGEQQ 431
                                     |:.||::.|                               
Zfish   234 -------------------------VIEVKEAER------------------------------- 242

  Fly   432 LLPAGGDGGSCQPGGGHSGGGKSDAEISTESGSDPKGCIQVCVTQADEQTSLKLTPPQSSTGVAA 496
                                                                   .||.:..|..
Zfish   243 -------------------------------------------------------QPQMAFTVRH 252

  Fly   497 VSVTPLQKKTSGVNQFIEEKQKISLSKERRAARTLGIIMGVFVICWLPFFLMYVILPFCQTCCPT 561
            .:|:           |..:.:.....||||||..:||::||||:||:||||..:|:|.| :|...
Zfish   253 ATVS-----------FQTDGETWREQKERRAALMVGILIGVFVLCWIPFFLAELIIPLC-SCDIP 305

  Fly   562 NKFKNFITWLGYINSGLNPVIYTIFNLDYRRAFKRL 597
            ..:|:...||||.||..||:|||.||.:|..||:.|
Zfish   306 PVWKSVFLWLGYSNSFFNPLIYTAFNKNYNNAFRNL 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oct-TyrRNP_524419.2 7tmA_tyramine_octopamine_R-like 110..>294 CDD:320188 71/185 (38%)
TM helix 1 111..137 CDD:320188 8/25 (32%)
TM helix 2 144..170 CDD:320188 8/25 (32%)
TM helix 3 182..212 CDD:320188 20/29 (69%)
TM helix 4 224..247 CDD:320188 10/23 (43%)
TM helix 5 266..294 CDD:320188 9/27 (33%)
7tm_GPCRs <519..594 CDD:475119 37/74 (50%)
TM helix 6 528..550 CDD:410628 13/21 (62%)
TM helix 7 562..587 CDD:410628 12/24 (50%)
htr5abNP_001007122.1 7tmA_5-HT5 31..338 CDD:320451 127/485 (26%)
TM helix 1 32..58 CDD:320451 8/25 (32%)
TM helix 2 65..91 CDD:320451 8/25 (32%)
TM helix 3 104..134 CDD:320451 20/29 (69%)
TM helix 4 146..167 CDD:320451 8/20 (40%)
TM helix 5 186..215 CDD:320451 9/28 (32%)
TM helix 6 267..297 CDD:320451 18/29 (62%)
TM helix 7 306..331 CDD:320451 12/24 (50%)

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