DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oct-TyrR and HTR1F

DIOPT Version :10

Sequence 1:NP_524419.2 Gene:Oct-TyrR / 42452 FlyBaseID:FBgn0004514 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_000857.1 Gene:HTR1F / 3355 HGNCID:5292 Length:366 Species:Homo sapiens


Alignment Length:501 Identity:149/501 - (29%)
Similarity:221/501 - (44%) Gaps:174/501 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 LLTALVLSVIIVLTIIGNILVILSVFTYKPLRIVQNFFIVSLAVADLTVALLVLPFNVAYSILGR 174
            :|.:|.||.:.::|...|.|||.::...:.|....|:.|.||||.|..||:||:||::.|.:...
Human    24 ILVSLTLSGLALMTTTINSLVIAAIIVTRKLHHPANYLICSLAVTDFLVAVLVMPFSIVYIVRES 88

  Fly   175 WEFGIHLCKLWLTCDVLCCTSSILNLCAIALDRYWAITDPINYAQKRTVGRVLLLISGVWLLSLL 239
            |..|..:|.:||:.|:.|||.|||:|.|||||||.||||.:.||:|||.....::|:.||::|:.
Human    89 WIMGQVVCDIWLSVDITCCTCSILHLSAIALDRYRAITDAVEYARKRTPKHAGIMITIVWIISVF 153

  Fly   240 ISSPPLIGWNDWPDEFTSATPCELTSQRGYV---IYSSLGSFFIPLAIMTIVYIEIFVATRRRLR 301
            ||.|||.    |..:.||... |...:..::   |||:.|:|:||||::.|:|.:|:        
Human   154 ISMPPLF----WRHQGTSRDD-ECIIKHDHIVSTIYSTFGAFYIPLALILILYYKIY-------- 205

  Fly   302 ERARANKLNTIALKSTELEPMANSSPVAASNSGSKSRLLASWLCCGRDRAQFATPMIQNDQESIS 366
                                                                             
Human   206 ----------------------------------------------------------------- 205

  Fly   367 SETHQPQDSSKAGPHGNSDPQQQHVVVLVKKSRRAKTKDSIKHGKTRGGRKSQSSSTCEPHGEQQ 431
                                            |.|||   :.|       |.|:|...:.....|
Human   206 --------------------------------RAAKT---LYH-------KRQASRIAKEEVNGQ 228

  Fly   432 LLPAGGDGGSCQPGGGHSGGGKSDAEIST-----ESGSDPKGCIQVCVTQADEQTSLKLTPPQSS 491
            :|...|:              ||...:||     :|.|||.       |..|:..|         
Human   229 VLLESGE--------------KSTKSVSTSYVLEKSLSDPS-------TDFDKIHS--------- 263

  Fly   492 TGVAAVSVTPLQKKTSGVNQFIEEK----QKISLSKERRAARTLGIIMGVFVICWLPFFLMYVIL 552
                  :|..|:      ::|..||    ||||.::||:||.|||:|:|.|||||||||:..:::
Human   264 ------TVRSLR------SEFKHEKSWRRQKISGTRERKAATTLGLILGAFVICWLPFFVKELVV 316

  Fly   553 PFCQTCCPTNKFKNFITWLGYINSGLNPVIYTIFNLDYRRAFKRLL 598
            ..|..|..:.:..||:.||||:||.:||:||||||.|:::||::|:
Human   317 NVCDKCKISEEMSNFLAWLGYLNSLINPLIYTIFNEDFKKAFQKLV 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oct-TyrRNP_524419.2 7tmA_tyramine_octopamine_R-like 110..>294 CDD:320188 78/186 (42%)
TM helix 1 111..137 CDD:320188 9/25 (36%)
TM helix 2 144..170 CDD:320188 13/25 (52%)
TM helix 3 182..212 CDD:320188 19/29 (66%)
TM helix 4 224..247 CDD:320188 9/22 (41%)
TM helix 5 266..294 CDD:320188 12/30 (40%)
7tm_GPCRs <519..594 CDD:475119 39/74 (53%)
TM helix 6 528..550 CDD:410628 15/21 (71%)
TM helix 7 562..587 CDD:410628 14/24 (58%)
HTR1FNP_000857.1 7tmA_5-HT1F 24..359 CDD:320456 147/496 (30%)
TM helix 1 25..51 CDD:320456 9/25 (36%)
TM helix 2 58..84 CDD:320456 13/25 (52%)
TM helix 3 96..126 CDD:320456 19/29 (66%)
DRY motif, important for ligand-induced conformation changes. /evidence=ECO:0000250|UniProtKB:P41595 120..122 1/1 (100%)
TM helix 4 138..160 CDD:320456 8/21 (38%)
TM helix 5 178..207 CDD:320456 12/133 (9%)
TM helix 6 286..316 CDD:320456 18/29 (62%)
TM helix 7 326..351 CDD:320456 14/24 (58%)
NPxxY motif, important for ligand-induced conformation changes and signaling. /evidence=ECO:0000250|UniProtKB:P41595 343..347 2/3 (67%)

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