DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oct-TyrR and HTR1D

DIOPT Version :9

Sequence 1:NP_001163494.1 Gene:Oct-TyrR / 42452 FlyBaseID:FBgn0004514 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_000855.1 Gene:HTR1D / 3352 HGNCID:5289 Length:377 Species:Homo sapiens


Alignment Length:522 Identity:147/522 - (28%)
Similarity:224/522 - (42%) Gaps:169/522 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 EGAVEELHASILGLQLAVPEWE-------ALLTALVLSVIIVLTIIGNILVILSVFTYKPLRIVQ 144
            ||..:|.....|........|:       .:..|:|||||.:.|::.|..|:.::...:.|....
Human     9 EGLPQEASNRSLNATETSEAWDPRTLQALKISLAVVLSVITLATVLSNAFVLTTILLTRKLHTPA 73

  Fly   145 NFFIVSLAVADLTVALLVLPFNVAYSILGRWEFGIHLCKLWLTCDVLCCTSSILNLCAIALDRYW 209
            |:.|.|||..||.|::||:|.::||:|...|.||..||.:||:.|:.|||:|||:||.|||||||
Human    74 NYLIGSLATTDLLVSILVMPISIAYTITHTWNFGQILCDIWLSSDITCCTASILHLCVIALDRYW 138

  Fly   210 AITDPINYAQKRTVGRVLLLISGVWLLSLLISSPPLIGWNDWPDEFTSATPCELTSQRGYVIYSS 274
            ||||.:.|:::||.|....:|:.||.:|:.||.|||. |.....:...:.....|||..|.|||:
Human   139 AITDALEYSKRRTAGHAATMIAIVWAISICISIPPLF-WRQAKAQEEMSDCLVNTSQISYTIYST 202

  Fly   275 LGSFFIPLAIMTIVYIEIFVATRRRLRERARANKLNTIALKSTELEPMANSSPVAASNSGSKSRL 339
            .|:|:||..::.|:|..|:.|.|.|:        ||..:|.....    .::.:...::||.   
Human   203 CGAFYIPSVLLIILYGRIYRAARNRI--------LNPPSLYGKRF----TTAHLITGSAGSS--- 252

  Fly   340 LASWLCCGRDRAQFATPMIQNDQESISSETHQPQDSSKAGPHGNSDPQQQHVVVLVKKSRRAKTK 404
                ||                  |::|..|:                                 
Human   253 ----LC------------------SLNSSLHE--------------------------------- 262

  Fly   405 DSIKHGKTRGGRKSQSSSTCEPHGEQQLLPAGGDGGSCQPGGGHSGGGKSDAEISTESGSDPKGC 469
                                                      |||           .|...|...
Human   263 ------------------------------------------GHS-----------HSAGSPLFF 274

  Fly   470 IQVCVTQADEQTSLKLTPPQSSTGVAAVSVTPLQKKTSGVNQFIEEKQKISLSKERRAARTLGII 534
            ..|.:..||...                                 |:::||.::||:|.:.||||
Human   275 NHVKIKLADSAL---------------------------------ERKRISAARERKATKILGII 306

  Fly   535 MGVFVICWLPFFLMYVILPFCQTCC---PTNKFKNFITWLGYINSGLNPVIYTIFNLDYRRAFKR 596
            :|.|:|||||||::.::||.|:..|   |.  ..:|.|||||:||.:||:|||:||.::|:||::
Human   307 LGAFIICWLPFFVVSLVLPICRDSCWIHPA--LFDFFTWLGYLNSLINPIIYTVFNEEFRQAFQK 369

  Fly   597 LL 598
            ::
Human   370 IV 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oct-TyrRNP_001163494.1 Zinc_peptidase_like <113..244 CDD:301362 61/130 (47%)
7tm_1 126..>293 CDD:278431 71/166 (43%)
HTR1DNP_000855.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 4/13 (31%)
7tmA_5-HT1B_1D 35..367 CDD:320455 140/490 (29%)
TM helix 1 40..66 CDD:320455 9/25 (36%)
TM helix 2 73..99 CDD:320455 12/25 (48%)
TM helix 3 111..141 CDD:320455 20/29 (69%)
Agonist binding. /evidence=ECO:0000250 114..123 4/8 (50%)
DRY motif, important for ligand-induced conformation changes. /evidence=ECO:0000250 135..137 1/1 (100%)
TM helix 4 153..176 CDD:320455 10/23 (43%)
TM helix 5 194..223 CDD:320455 12/28 (43%)
TM helix 6 294..324 CDD:320455 16/29 (55%)
Agonist binding. /evidence=ECO:0000250 314..318 3/3 (100%)
TM helix 7 335..360 CDD:320455 14/26 (54%)
NPxxY motif, important for ligand-induced conformation changes and signaling. /evidence=ECO:0000250 352..356 2/3 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H20240
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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