DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oct-TyrR and dop-3

DIOPT Version :10

Sequence 1:NP_524419.2 Gene:Oct-TyrR / 42452 FlyBaseID:FBgn0004514 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001024908.2 Gene:dop-3 / 188499 WormBaseID:WBGene00020506 Length:607 Species:Caenorhabditis elegans


Alignment Length:636 Identity:169/636 - (26%)
Similarity:258/636 - (40%) Gaps:174/636 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 HASILGLQLAVPEWEALLTALVLSVIIVLTIIGNILVILSVFTYKPLRIVQNFFIVSLAVADLTV 158
            |.:.:...|.|..|. :...:.|.::..:.:.||:|||:|||..:.|:.|.|..||||||:|..|
 Worm     7 HVTDIESPLMVVLWR-VAAGVFLPLVPTMAVFGNVLVIMSVFRERSLQTVTNMLIVSLAVSDFMV 70

  Fly   159 ALLVLPFNVAYSILG-RWEFGIHLCKLWLTCDVLCCTSSILNLCAIALDRYWAITDPINYAQ-KR 221
            |:.|:.|.|.|.... :|..|...|.::...||.|.|:|||||.||:||||.||..||:||| ..
 Worm    71 AIGVMSFGVYYEWNDFKWGLGSFFCHVYQALDVACSTASILNLLAISLDRYIAIGHPISYAQYGA 135

  Fly   222 TVGRVLLLISGVWLLSLLISSPPLIGWNDWPDEFTSATPCELTSQRGYVIYSSLGSFFIPLAIMT 286
            ..||.::.|:.||.:|:.::.|.|:|.|  |.|......|||.:.. :.:.||:.|||||...|.
 Worm   136 RGGRAMISITIVWGVSVAVALPLLLGVN--PMEENDLQECELANPY-FNMISSIFSFFIPCIAMI 197

  Fly   287 IVYIEIFVATRRRLRERARA---------------------------------NKLNTIALKSTE 318
            |:|..||    ||||:|.||                                 |:.:.|.|   |
 Worm   198 ILYTIIF----RRLRQRERARSLRQAQRSENDKISSALLGGAQIARQMGKHFKNRTDQILL---E 255

  Fly   319 LEPMANSSPVAASNSGSKSRLLASWLCCGRDRAQFATPMIQNDQESISSETHQPQDSSKAGPHGN 383
            :....:|.|..:.:|...|.:               :|||.:....:..:|..|..|..|.|...
 Worm   256 ISFQTSSFPTMSESSEDASTI---------------SPMINSFNNFLPKKTPYPSTSIPAIPECG 305

  Fly   384 SDPQQQHVVVLVKKSRRAKTKD------------------------------------------- 405
            |.|.    :.::::....|.|:                                           
 Worm   306 SMPN----LTIIERPEAEKEKEISIMDLRDTVEMLDDKYSSAILTSFQTSRSFGEELEEILPFID 366

  Fly   406 ---SIKHGK-----TRGGRKS----------QSSSTCEPHGEQQL------LPAGGDGGSCQ--- 443
               |:||.:     ||....:          :|.|......|::|      ||.....|:.:   
 Worm   367 GSNSVKHSREQLHTTRSNTSTTRLLDVKPELRSISVPSIQDEKKLSQKSNDLPFSHQNGTHKQKL 431

  Fly   444 -PGGGHSGGGKSDAEISTESGSDPKGCIQVCVTQADEQTSLKLTPPQSSTGVAAVS--------- 498
             |..|.....||...:.|....|         |.:..:.|.|    :|...:.|..         
 Worm   432 LPNPGILMKSKSTTLLKTNGYMD---------TDSLNRNSHK----KSLADLLANDEFSFSDSMR 483

  Fly   499 ------VTPLQKKTSGVN-----QFIEEKQKISLSKERRAARTLGIIMGVFVICWLPFFLMYVIL 552
                  ...|.:.|||.|     :.:.:|....:.:|.:|..||.:::.||:.||||||::::..
 Worm   484 VYKNRLFKSLSRATSGWNKPRPSRHMVKKATKQMRREHKATVTLAVVLAVFLFCWLPFFVLHLSN 548

  Fly   553 PFCQTCCPTNKFKNFI-----TWLGYINSGLNPVIYTIFNLDYRRAFKRLL 598
            ..|......:....|:     |||||:||.|||:|||:|:..:|.||:.:|
 Worm   549 SICLIIDENSACVGFLPLYLATWLGYLNSSLNPLIYTVFDQRFRNAFRNIL 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oct-TyrRNP_524419.2 7tmA_tyramine_octopamine_R-like 110..>294 CDD:320188 76/185 (41%)
TM helix 1 111..137 CDD:320188 9/25 (36%)
TM helix 2 144..170 CDD:320188 13/25 (52%)
TM helix 3 182..212 CDD:320188 17/29 (59%)
TM helix 4 224..247 CDD:320188 8/22 (36%)
TM helix 5 266..294 CDD:320188 11/27 (41%)
7tm_GPCRs <519..594 CDD:475119 29/79 (37%)
TM helix 6 528..550 CDD:410628 10/21 (48%)
TM helix 7 562..587 CDD:410628 14/29 (48%)
dop-3NP_001024908.2 7tmA_D2-like_dopamine_R 22..>204 CDD:320181 75/184 (41%)
TM helix 1 23..49 CDD:320181 9/25 (36%)
TM helix 2 56..82 CDD:320181 13/25 (52%)
TM helix 3 95..125 CDD:320181 17/29 (59%)
TM helix 4 138..161 CDD:320181 8/22 (36%)
TM helix 5 177..204 CDD:320181 10/27 (37%)
7tm_GPCRs <515..595 CDD:475119 29/79 (37%)
TM helix 6 524..546 CDD:410628 10/21 (48%)
TM helix 7 563..588 CDD:410628 14/24 (58%)

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